AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi7g01020 ATGCAGCAGCAAGCTCAGGCGCCGGTGGCCGGCACGCCACAACCGGAGCCGCCGGAATCTGGAGAATCTCCGGGGGAGGCTCCACCAAAACAGGTGGCGCTGGCGATGGACAGACTAGGGCACGCGGCTCGTCTAATTGCAGACATCAGGATCGGAGCCGATCGCCTTCTCGAAGCACTCTTCATCGCCGCACAACCTCATCAATCCAATAAACCCATGAATTTGATCCTCAAAGAAGAGGCTTCAATGCGACAACACCTTCAAGATCTCCGAACCGTCGTAAATGTTAACATCCTTAAATGTAAATCATTTTCTTTGTTAGGAAGGCAACTGGAAGATTCTGGGGTTCTCAATGGATCTCTTAGATCACGAAGTAATTCCTGGGGCTTGCACATGCCGCTTGTTTGTCCAGATGGTGCTGTTGTTGCGTATGCTTGGAAACGTCAACTCGCTGGCCAGGCTGGTGCATCTGCTGTTGACAGAACCAGGCTAGCTCTCAAGGCATTTACTGATCAGAAGAGGCGATTTTTTCCGCACCTTGAAGACAGATCATTTGGCCAAACTTCTGGTGGGGAGTCTATAGTTTCAAAGAAACATTGTGTTTCCCAGGTGTCAACGTTGAGTTATAAAGAAGAGCTTATTGAAGACAGAACATTATCCAGTGTTCTAATGCGCTTGGAAAAAGAGGAACCTAGCATGGAAATTTTCACTTACCAGCGCTTGGATTGGTTAAAAAGAGCTTCGTCGATGTCCTCTTCAGCAAACGAAAATTCTATCCAGTCATCCAAGGAATATAATATCCACACATCAAATAAAAGAACAGAGTCACTAGATGCTGCTGCTGCAAATCAGGTTTCCGTTGTTGAGTTATTGGTTCCTTCTGTTTTTAGGGCTATAGTATCCTTGCATCCAGCTGGATCTGTAGATCCTGATGCAGTAGCATTCTTCTCGCCGGACGAGGTAATAATCTTGTTAAGAAGATGCTATTTTCATCTGATCCTCAACACTTGCATTTCTCAGAATAATTTTGCTCCCCTAGAACATGCTGTCGTGGCTTTGCAGTATTTTCTTGGCCTCAAAACTGATACAGCTTTGTATCTTCTTCTGAACTGGATCTGCAGCTATCAAACTCTATTTACGAAAGTTTGCAGGCAATCGGCTTTACTCTTGCCTCCTGTTCATCGTCCTTACCAACACTCTTCTGCTACAAAAATTTCATCAACCCAATCAACATTTGGAACGAAGGACCAGAGCTTGGATGTCACGATGGCTTATCATATTGGATGTTCTTCGGATGAAGCCTAG 1305 45.44 MQQQAQAPVAGTPQPEPPESGESPGEAPPKQVALAMDRLGHAARLIADIRIGADRLLEALFIAAQPHQSNKPMNLILKEEASMRQHLQDLRTVVNVNILKCKSFSLLGRQLEDSGVLNGSLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDRSFGQTSGGESIVSKKHCVSQVSTLSYKEELIEDRTLSSVLMRLEKEEPSMEIFTYQRLDWLKRASSMSSSANENSIQSSKEYNIHTSNKRTESLDAAAANQVSVVELLVPSVFRAIVSLHPAGSVDPDAVAFFSPDEVIILLRRCYFHLILNTCISQNNFAPLEHAVVALQYFLGLKTDTALYLLLNWICSYQTLFTKVCRQSALLLPPVHRPYQHSSATKISSTQSTFGTKDQSLDVTMAYHIGCSSDEA 434
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi7g01020 434 MobiDBLite consensus disorder prediction 1 29 - -
Tesi7g01020 434 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 14 430 IPR021627 GO:0003713(PANTHER)|GO:0006357(PANTHER)|GO:0016592(PANTHER)|GO:0016592(InterPro)
Tesi7g01020 434 Pfam Mediator complex subunit 27 347 429 IPR021627 GO:0016592(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi7g01020 K15170 mediator of RNA polymerase II transcription subunit 27