Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi7g01084 | ATGAGGACTTCAAGGATTCATATCAAGGAGGTTGAGAAAGTGGTTACAAATATTAGCGACAATGATGATGGCGATGATGACAACGATGATGGAGGGGATGTTAGGGGGACGTCAGATGGGCTGTCACATACACAATCAGAGGAGAGTCATGAGCAGGGGAGGCACGATATTGTATTTACAGAAGAACAATATTTCGACCGTGCCACCCAGGACACTAATATGTTGCGTGTATGCCCTATTGTGGTTATGGCTTATGAGAGCCAGACATACGAGCAACGGAGTCGTGGTATTGTGCGACAGGCTGGACGAGGCATTGATGACCTGATTTATAGGATGGATAGAAATACTAGGATAGGCAAAGGTGTTAGAGCTGGCGCAAAAGAATCAAAACCAATTTCCAATGAGCTTGCTTCTGCAATAAATGACGGCCTTTACTTTTATGAGCAGGAGTTGAGAGCTATGAGATCTAATAATAGAAGGAATAACCCAGGGCTAGACATTGGAGATGGTGAAGCTAGATCTTCCAACACTGTTCCTGGATTACCAAATTCAAAGATCAGTGTGAATTCTGCTGGAAGCAATGGCTACGAGGTGCCTGGCAATGCTAATTCCCAGAGGAAGCAAAATAAAGGTGTTAACAAACAATGGTCATCCCATAAGCAGCGCTTGTTTCCCAGCAATTTCAGAAACCATGGATATGGTCATAACCGTCATGGCATCATCGTATCAGAAAGTCCTCCAAGCAATTCAGTTGGGTTTTTCTTTGGGTCAACGCCTCCGGAAAGTCATAGTCCTATGTCTTCAAAACTGAGTGCTTCACCTCATGGGATCCTTTCTGGGAGTAGTCCACTGGTGGGTTCTATGCCAAAACCTTTTCCGCCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAGTGGTTTCAGGCAGCAGAAGTACCTGAAGTTCCACAAGCGTTGCATAAGTGACCGAAAGAGACTGGGAATCGGATGCAGCGAGGAAATGAATACCCTCTACCGGTTTTGGTCATTTTTCCTCCGAAGCATGTTCTTTCCTTCAATGTACAATGAATTCCGGAAATTAGCACTGGAAGATGCAGTTGCTAAGTATAATTATGGAGTAGAATGCCTTTTCAGGTTCTTTAGTTACGGGCTAGAGAAGCAATTCAGAGAAGATCTGTATGATGACTTTGAACAGCTCACTCTCGAATTCTACAATAAAGGCAATCTTTATGGCCTTGAAAAATACTGGGCCTTCCACCATTACCGGGAAGTACGTGACCAGAAAGCCCCTCTAAAGAAGCATCCAGAATTGGGTAGGTTGCTGAAGAAAGAATACCATAGCTTAGATGACTTCCGTACGAAAGAGAAGGCGATGAGACGGTAG | 1386 | 44.16 | MRTSRIHIKEVEKVVTNISDNDDGDDDNDDGGDVRGTSDGLSHTQSEESHEQGRHDIVFTEEQYFDRATQDTNMLRVCPIVVMAYESQTYEQRSRGIVRQAGRGIDDLIYRMDRNTRIGKGVRAGAKESKPISNELASAINDGLYFYEQELRAMRSNNRRNNPGLDIGDGEARSSNTVPGLPNSKISVNSAGSNGYEVPGNANSQRKQNKGVNKQWSSHKQRLFPSNFRNHGYGHNRHGIIVSESPPSNSVGFFFGSTPPESHSPMSSKLSASPHGILSGSSPLVGSMPKPFPPFQHPSHQLLEESGFRQQKYLKFHKRCISDRKRLGIGCSEEMNTLYRFWSFFLRSMFFPSMYNEFRKLALEDAVAKYNYGVECLFRFFSYGLEKQFREDLYDDFEQLTLEFYNKGNLYGLEKYWAFHHYREVRDQKAPLKKHPELGRLLKKEYHSLDDFRTKEKAMRR | 461 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi7g01084 | 461 | SMART | dm15 | 307 | 348 | IPR006607 | GO:0000339(InterPro)|GO:0048255(InterPro) | |
| Tesi7g01084 | 461 | SMART | dm15 | 388 | 423 | IPR006607 | GO:0000339(InterPro)|GO:0048255(InterPro) | |
| Tesi7g01084 | 461 | SMART | dm15 | 349 | 387 | IPR006607 | GO:0000339(InterPro)|GO:0048255(InterPro) | |
| Tesi7g01084 | 461 | MobiDBLite | consensus disorder prediction | 157 | 219 | - | - | |
| Tesi7g01084 | 461 | MobiDBLite | consensus disorder prediction | 15 | 55 | - | - | |
| Tesi7g01084 | 461 | MobiDBLite | consensus disorder prediction | 176 | 219 | - | - | |
| Tesi7g01084 | 461 | Pfam | LARP1 HEAT repeat region | 297 | 447 | IPR006607 | GO:0000339(InterPro)|GO:0048255(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi7g01084 | K18757 | la-related protein 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr13:23604634 | Tesi7g01084 | Tesi-Chr7:28725003 | dispersed | |
| Tesi | Tesi-Chr7:28725003 | Tesi9g00503 | Tesi-Chr9:34566647 | transposed |