Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi7g01261 | ATGCAAGGAAAACCCAAGAGGAGAACAGTTACAGAGAATGGGGATGGGGCAGGTGACTTGGTCCTTGCCACTTCGATTGGGAATGGGGAGGATTTGGGTCCTATTGTCAGGCATGCGTTTGAAATGGGGAGGCCCGACGCTCTACTGCACCAGCTCAAAAATGTCATGAAGAAGAAGGAAGTTGAGATTGAAGAGCTCTGCAAGCTTCATTATGAGGAATTCATTCTTGCTGTTGATGAGCTCCGTGGTGTCTTGGTCGATGCTGAAGAGCTGAAGAGTGAGCTCTCAAGTGACAATTTCAGGCTTCAGGAGGTGGGGAGCTCTCTTCTGCTAAAACTTGAAGAGCTCCTTGAGTCATATTCTATCAAGAAGAATGTTACTGAGGCTATAAAAATGTCCAAGACCTGTGAGCAAGTCTTGGATCTGTGTGTGAAGTGTAACCAACACATATCTGAAGGTCAATTTTACCCTGCTTTAAAGACTCTGGACCTGATTGAGAGAAATTATCTGCACAATGTCCCTGTTAAGGCTCTCCGGAAGGTGATCGAGATGCGAATACCAGCAATAAAGTCACATATTGAGAAGAAAGTGTGCAGTGAGTTTAATGAGTGGCTGGTGCACATAAGGAGAACATCAAGAGATATTGGACAGATCGCTATAGGACAGGCGGCATCGGCCCGTCAGAGGGACGAGGAAATGAGGGCCCGCCAGCGGGAGGCCGAGGAACAGAGCCGTTCAGGGTTAGGAGATTGTGTGTATACCTTAGATGTCGATGAGATTGATGAAGATTCAGTTCTCAAGTTCGACCTTACTCCTGTATATCGGGCATACCACATCCACACTTGCCTTGAGATTCAAGATCAATTCCGTGAATACTACTATAAGAATCGGTTGTTACAGCTCAAATCGGACTTACAAATATCATCAATACAACCATTTCTTGAATCCCATCAAACATTCTTTGCTCAAATTGCAGGGTACTTCATCGTGGAGGACCGGGTCCTACGGACTGCAGGGGGACTGCTGTCAGCTAATCAGGTTGGGACGATATGGGAAACTGCTGTTGCAAAGATGACATCAGTGTTGGAGGAACAGTTTTCACGTATGGATATCGCAAGCCATCTACTCCTAATCAAGGACTATGTGACTCTTCTAGGCGCGACTCTTCGACGATATGGGTACCAAGTGGGACCCCTACTTGAGGTTCTTGACAATAGCACAGACAAATACCACGAGCTTCTTTTAGAAGAGTGTCGGCAGCAGATGGTCGATATCATTGCCCATGACAGTTATGAGCAGATGGTGATGAAAAAGGAGTACGAGTACACTATGAACGTTTTGTCATTCCATCTCCAGAGCTCAGATATAATGCCTGCCTTCCCATATATTGCACCCTTCTCCTCCACCGTACCTGATACCTGCCGCATCGTTCGATCATTCATTGGGGACTCTGTCAGTTACTTGTCTTATGGCGGCCGCATGAATTTCTATGATGTTGTGAAGAAGTACCTGGACAAGCTCTTGATTGATGTGTTAAATGAGGCTCTACTGAAAGCGATTCACAGTTGCAACACTGGTGTGTCTCAAGCAATGCAGATAGCTTCAAACATAACTGTTCTTGAGCGGGCTTGTGATTTATTTCTTCGACAGGCAGCCCAACACTGTGGGATCCCTATACGATCAGTTGAGAGGCCTCAAGCTAGTCTAACTGCTAAGGCGGTTCTAAAGACATCAAGGGATGCCTCCTATCTTGCTCTGTTGAACCTAGTGAACTCTAAGGTGGATGAGTTTATGGCACCGATGGGTGATATCAATTGGACGACGGAGGAGATCCCACAGAATGGGAATGAGTTTATACATGAGGTGGTGTTCTACCTCGACACCCTGATATCCACAGCTCAACAAATTTTACCTTTGGATGCCGTGTACAAGGTTGGGAGTGGGGCCCTCGAGCACGTTTCCAACTTGATTGTGGCAGCTCTTCTCAGTGACAGCGTGAAGAGGTTCAATGTGAATGCAATCATGGGCATTGACAATGATCTGAAGATGTTAGAGTCCTTTGCAGATGAGAGGTTCCACAGCACTGGATTGAGTGAGATACACATGGAAGGTAGTCTAAGAGACTGCTTGATAGAAGCTCGACAATTAACCAACCTTCTATTGAGCAACCAGCCAGAGAACTTCATGAATCCTGTGATACGGGAGAAACACTACAACACTTTGGACTATAAGAAGGTTGCCAGTATTTGTGAGAAATTTAAAGATTCCCCAGATAGGCTCTTTGGAAGCCTTTCAAGCCGGAATACGAAGCAAAATGCTCGAAAGAAGTCAATGGACATGTTGAAAAGAAGACTAAGGGATTTCAATTGA | 2370 | 45.65 | MQGKPKRRTVTENGDGAGDLVLATSIGNGEDLGPIVRHAFEMGRPDALLHQLKNVMKKKEVEIEELCKLHYEEFILAVDELRGVLVDAEELKSELSSDNFRLQEVGSSLLLKLEELLESYSIKKNVTEAIKMSKTCEQVLDLCVKCNQHISEGQFYPALKTLDLIERNYLHNVPVKALRKVIEMRIPAIKSHIEKKVCSEFNEWLVHIRRTSRDIGQIAIGQAASARQRDEEMRARQREAEEQSRSGLGDCVYTLDVDEIDEDSVLKFDLTPVYRAYHIHTCLEIQDQFREYYYKNRLLQLKSDLQISSIQPFLESHQTFFAQIAGYFIVEDRVLRTAGGLLSANQVGTIWETAVAKMTSVLEEQFSRMDIASHLLLIKDYVTLLGATLRRYGYQVGPLLEVLDNSTDKYHELLLEECRQQMVDIIAHDSYEQMVMKKEYEYTMNVLSFHLQSSDIMPAFPYIAPFSSTVPDTCRIVRSFIGDSVSYLSYGGRMNFYDVVKKYLDKLLIDVLNEALLKAIHSCNTGVSQAMQIASNITVLERACDLFLRQAAQHCGIPIRSVERPQASLTAKAVLKTSRDASYLALLNLVNSKVDEFMAPMGDINWTTEEIPQNGNEFIHEVVFYLDTLISTAQQILPLDAVYKVGSGALEHVSNLIVAALLSDSVKRFNVNAIMGIDNDLKMLESFADERFHSTGLSEIHMEGSLRDCLIEARQLTNLLLSNQPENFMNPVIREKHYNTLDYKKVASICEKFKDSPDRLFGSLSSRNTKQNARKKSMDMLKRRLRDFN | 789 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi7g01261 | 789 | Coils | Coil | 78 | 98 | - | - | |
| Tesi7g01261 | 789 | Coils | Coil | 223 | 243 | - | - | |
| Tesi7g01261 | 789 | Gene3D | - | 395 | 563 | IPR042045 | - | |
| Tesi7g01261 | 789 | FunFam | Exocyst complex component | 396 | 564 | - | - | |
| Tesi7g01261 | 789 | Pfam | Exocyst complex subunit Sec15 C-terminal | 398 | 752 | IPR046361 | - | |
| Tesi7g01261 | 789 | Pfam | Exocyst complex component EXOC6-Sec15, N-terminal | 51 | 220 | IPR048359 | - | |
| Tesi7g01261 | 789 | PANTHER | SEC15 | 18 | 788 | IPR007225 | GO:0000145(PANTHER)|GO:0006886(InterPro)|GO:0006887(PANTHER)|GO:0006893(PANTHER)|GO:0016020(PANTHER)|GO:0090522(InterPro) | |
| Tesi7g01261 | 789 | FunFam | Exocyst complex component | 578 | 728 | - | - | |
| Tesi7g01261 | 789 | Gene3D | Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 578 | 728 | IPR042044 | - | |
| Tesi7g01261 | 789 | Coils | Coil | 49 | 69 | - | - | |
| Tesi7g01261 | 789 | PIRSF | Sec15 | 1 | 789 | IPR007225 | GO:0006886(InterPro)|GO:0090522(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi7g01261 | K19985 | exocyst complex component 6 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr16:36910341 | Tesi7g01261 | Tesi-Chr7:38942832 | transposed | |
| Tesi | Tesi-Chr7:38695059 | Tesi7g01261 | Tesi-Chr7:38942832 | transposed | |
| Tesi | Tesi-Chr11:30719181 | Tesi7g01261 | Tesi-Chr7:38942832 | wgd |