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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi7g01498 ATGGCTAGGGTTTTAAAGGTAGTAAGCACCAGACTCCCTCAGAGAGATTTCATCTCTCTCCTACTCGTCAGTCCTTGGCTCTACCGTTCTCTCGTCTCGTACCCATCTCTCTGGCAGGTTCTTGATTTGCATGAGATGAATAATGCTGGCGATCGACTCCTATCTGCTCTTTCACTGTGTATGGAATCACTTCAAGACTTGGAGTCTCTAAATCTAAATGTCTGCCAAAAGATCTCTGATAAAGGAATTGAAGCTGTAACTAATTCTTGCCTGAAACTCAAGGCCTTATCTATCTATTGGAATGTTAGGGTAACAGATTTAGGTATAGAACATATGGTGAAGAACTGCAAGCACATGGTTGATTTGAACTTGAGCGGCTGTAAGATTGATATTGCCGCAGTCTTGAAATGCAGATTTAAGAATGTTTCAGACAAAAGTTTGCTACTAATTGCTGAAAATTACCAAGAGCTGAAGTTCTTGAATTTGACCAGGTGCATCAAGCTAACAGATGGTGGATTGCAACAGATACTGCTCAAGTGTTCTTCGCTTGAAAGTTTAAACCTTTATGCACTCTCCAGTTTTACTGACGAAGCTTACAGGAAGATTGAGCTTCTAGGCAATCTTAGATTCTTAGACCTCTGTGGTGCACAGAATTTGTCTGATCAAGGTCTTTCCTGCATAGCAAAATGCAAGCATCTGGTGTCTCTGAATTTGACTTGGTGCGTACGTGTCACTGATGTGGGAGTCATAGCCCTTGCACAAGGTTGCTCATCTCTTGAGTTTCTTAGCTTGTTCGGAATTGTTGGGGTGACTGATAAATGCTTAGAGGCCCTCTCAAGGTTCTGCTCAAATACACTCACAACCCTCGATGTGAATGGATGTATCGGCATTAAGCGACGAAGCCGTGATGAACTGCTTCAATTGTTCCCTCATCTGAGGTGTTTTAAAGTGCACAGCTAA 960 42.4 MARVLKVVSTRLPQRDFISLLLVSPWLYRSLVSYPSLWQVLDLHEMNNAGDRLLSALSLCMESLQDLESLNLNVCQKISDKGIEAVTNSCLKLKALSIYWNVRVTDLGIEHMVKNCKHMVDLNLSGCKIDIAAVLKCRFKNVSDKSLLLIAENYQELKFLNLTRCIKLTDGGLQQILLKCSSLESLNLYALSSFTDEAYRKIELLGNLRFLDLCGAQNLSDQGLSCIAKCKHLVSLNLTWCVRVTDVGVIALAQGCSSLEFLSLFGIVGVTDKCLEALSRFCSNTLTTLDVNGCIGIKRRSRDELLQLFPHLRCFKVHS 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi7g01498 319 SMART LRR-CC-2 205 230 IPR006553 -
Tesi7g01498 319 SMART LRR-CC-2 256 281 IPR006553 -
Tesi7g01498 319 SMART LRR-CC-2 64 89 IPR006553 -
Tesi7g01498 319 SMART LRR-CC-2 116 137 IPR006553 -
Tesi7g01498 319 SMART LRR-CC-2 154 179 IPR006553 -
Tesi7g01498 319 SMART LRR-CC-2 231 255 IPR006553 -
Tesi7g01498 319 SMART LRR-CC-2 90 115 IPR006553 -
Tesi7g01498 319 FunFam Leucine Rich Repeat family protein 168 319 - -
Tesi7g01498 319 SUPERFAMILY RNI-like 28 309 - -
Tesi7g01498 319 PANTHER UNCHARACTERIZED 41 130 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Tesi7g01498 319 Pfam Leucine Rich repeat 65 85 IPR001611 GO:0005515(InterPro)
Tesi7g01498 319 Pfam Leucine Rich repeat 229 253 IPR001611 GO:0005515(InterPro)
Tesi7g01498 319 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Tesi7g01498 319 Gene3D Ribonuclease Inhibitor 137 319 IPR032675 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi7g01498 - -