Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi13g00833 | ATGGCGGCAGAGCAGCAGGTGCCGCTGTTGAAGAAGGTTTACTATCAGAATTGCTCAGGGTGTAGAGTGGAACAGCTTAAAGAGACCAGACGCGGTTTACCCATTAGGGAGCTTCTTTCTATATGGACTGTGGTGCTATGCACTGCATTGCCGATATCATCTCTCTTTCCATTCCTTTATTTCATGATTAGGGACTTCCATATAGCAAAAAGGGAGGAAGACATTGGTTACTATGCTGGTTATGTGGGGTCTGCATTTATGCTTGGAAGAGCATTGACATCTGTCGCCTGGGGAATGGTGGCTGATCGATATGGCCGAAAACCTGTTATAATGATAGGCACTATCGCAGTGGTTATTTTCAACACTCTTTTCGGTCTTAGTGTAAACTTCTGGATGGCCCTCTCTACAAGGTTTCTTCTTGGAAGTCTGAATGGTTTACTTGGGCCAATTAAGGCATATGCAGCTGAAATTTTCCGTGACGAATACCAAGCTCTAGGACTGTCAACAGTTAGTACAGCATGGGGCATAGGATTGATCATTGGACCAGCTTTGGGAGGTTTCCTTGCCCAGCCTGCAGAAAAGTATCCGGATATATTCTCTGAAGATTCTCTATTTGGAAGATTTCCATACTTCTTGCCCTGCCTGTTTATATCGGTTTATGCAATGATTGTAACCGTTGCTTGTTGTTGGCTTCCGGAAACATTGCACACACACAATGAAAACAAAAAATCAAGAGAAGACTCATATGATGCTTTGGAAGCGGCCAATGGTGGGTCTAATGCAAAAGAAAAAGAACAAGAAATTGAAGGAAGTGAACCAACTTCTAATGAAAGCCTCTTTATGAATTGGCCTTTGATGTCTTCTATCATTGTCTACTGTGTTTTTTCACTACATGATATGGCTTATACAGAGATATTCTCATTATGGGCTGTGAGTCCTAGAATACATGGGGGTTTGAGCTATTCAACTGATGATGTTGGTGTTGTTCTTGCAATCTCAGGTTTTGGCCTTTTAGTCTCCCAACTTACTCTATATCCACTTGTGGAGAGGTTTCTTGGGCCTGTGATGATCTGTCGCATTGCTGGTGTCTTGTCCATACCTTTGTTGGCGAGTTACCCTTTAATAGCCATGCTTTCTGGGTCCAGCCTCTCAGTGGTGTTGAATTGTGCATCTGTGCTAAAGAATGTTCTATCTGTGTCCATTATAACTGGCCTGTTCCTTCTGCAAAACAGTGCTGTGGACCAACACCAGAGAGGAACTGCTAATGGCATTTCTATGACTGCAATGTCTCTTTTCAAAGCAGCTGGTCCTGCTGGAGGAGGCGCACTCTTTTCTTGGGCACAAAAGCGACAGGATTCTGCTTTCTTCCCAGGTGACCAGATGGTTTTCTTAATCCTGAATGTGGTCGAGGCAATCGGAGTGCTCATGACATTCAAACCATTTCTAGTTCAAAGGCGTCGATAG | 1464 | 43.72 | MAAEQQVPLLKKVYYQNCSGCRVEQLKETRRGLPIRELLSIWTVVLCTALPISSLFPFLYFMIRDFHIAKREEDIGYYAGYVGSAFMLGRALTSVAWGMVADRYGRKPVIMIGTIAVVIFNTLFGLSVNFWMALSTRFLLGSLNGLLGPIKAYAAEIFRDEYQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPDIFSEDSLFGRFPYFLPCLFISVYAMIVTVACCWLPETLHTHNENKKSREDSYDALEAANGGSNAKEKEQEIEGSEPTSNESLFMNWPLMSSIIVYCVFSLHDMAYTEIFSLWAVSPRIHGGLSYSTDDVGVVLAISGFGLLVSQLTLYPLVERFLGPVMICRIAGVLSIPLLASYPLIAMLSGSSLSVVLNCASVLKNVLSVSIITGLFLLQNSAVDQHQRGTANGISMTAMSLFKAAGPAGGGALFSWAQKRQDSAFFPGDQMVFLILNVVEAIGVLMTFKPFLVQRRR* | 488 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi13g00833 | 487 | CDD | MFS-SLC46-TetA-like | 41 | 479 | - | - | |
| Vivi13g00833 | 487 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 37 | 485 | IPR020846 | GO:0022857(InterPro) | |
| Vivi13g00833 | 487 | MobiDBLite | consensus disorder prediction | 255 | 275 | - | - | |
| Vivi13g00833 | 487 | Pfam | Major Facilitator Superfamily | 42 | 437 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Vivi13g00833 | 487 | Gene3D | MFS general substrate transporter like domains | 35 | 478 | IPR036259 | - | |
| Vivi13g00833 | 487 | FunFam | Protein ZINC INDUCED FACILITATOR-LIKE 1 | 36 | 477 | - | - | |
| Vivi13g00833 | 487 | PANTHER | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 | 33 | 479 | - | GO:0005886(PANTHER)|GO:0009705(PANTHER)|GO:0022821(PANTHER)|GO:0090333(PANTHER) | |
| Vivi13g00833 | 487 | SUPERFAMILY | MFS general substrate transporter | 36 | 481 | IPR036259 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi13g00833 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr13:15304226 | Vivi13g00835 | Vivi-Chr13:15348468 | dispersed | |
| Vivi | Vivi-Chr13:15304226 | Vivi13g00834 | Vivi-Chr13:15320680 | tandem |