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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi13g00846 ATGAATTTATCAATTGGTTTGCAGGATGCACTTAGAGAACTCTGGATCTTAGCTTATCCTGGTAGGGAGCTCCCCTCTCTTAAGTCAGAGCTCTGGAAGGAGATGGGTTGGCAAGGTACTGATCCTTCAATAGATTTTAGGGGTGGCGGATTTATATCATTGGAGAATCTTATCTTTTTTGCCAAGAAGTATCCGGTTTGTTTCATGTTCTTTCTTTCCTTTTCCTTCAATGACATCACTTGA 243 40.74 MNLSIGLQDALRELWILAYPGRELPSLKSELWKEMGWQGTDPSIDFRGGGFISLENLIFFAKKYPVCFMFFLSFSFNDIT* 81
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi13g00846 80 Pfam ELMO-CED-12 family 8 72 IPR006816 -
Vivi13g00846 80 PANTHER ENGULFMENT AND CELL MOTILITY 8 73 IPR050868 -
Vivi13g00846 80 ProSiteProfiles ELMO domain profile. 6 80 IPR006816 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi13g00846 K23538 ELMO domain-containing protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr13:15573700 Vivi14g01502 Vivi-Chr14:29010761 dispersed