Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi13g00847	ATGTGTGCTCTCTTGGTAACGTTGTCTAACTTGGGAATTGGCACAGTCATGCATTATCATGTATTGTTGATCAAGATGACACCTGTCTGCCCTTTTGTCAAAGCTGCTCGTCCTGATGATGCCACTTCAAGGAAACCTAATGAATGCCCACATAAGCACCAGTTGGAGCTTGAAGGCAAGGGCAAAAAGGATTCTGGTGATTCTGCCAGCACGAAAAAGGATTCTGTTGATGCTGCCAGCATTTCACCAAAGTGTCCCTTTGGATATGATTCTCAAACTTTTAAGCTGGGTCCTCTCAGCTGTATGATATGCCAAGCGCTTCTCTTTGAAAGCAGCAAATGTGTGCCTTGTTCCCATGTATATTGCAAGGCATGTATATCACGTTTTAAAGATTGCCCATTATGTGGAGCTGACATTGAGAAGATTGAAGCTGATATGAATCTTCAGAATACAGTTGATCGCTTTATTGAAGGTCATGGTAGAATAAAGAGGCCTCATGTTAATACAGACTCAGAGGAAGCAGTGGGTGATGATAAAACAGTGATATATGAGGATGTGTCTTTGGAGAGAGGTGCATTCTTGGTGCAACACGCGATGAGGGCATTTCGTGCTAATAATGTTGAAAGTGCAAAATCAAGGCTTAGTATATGCGCAGAAGATATCCGTGGTCAGTTGGAAAAACTGGGCAACACATCTGAATTGTGTTCACAACTAGGAGCAGTTCTAGGTATGCTTGGGGACTGCTGTCGAGCAACAGGAGATGCTGATTCAGCAGTCACATATTTTGAAGAGAGTGTTGATTTCCTCAGAAAATTGCCAGCAGATGATCTGGAGATCACACATACCCTTTCTGTCTCACTCAATAAAATTGGAGATCTCAAATATTATGATGGGGACCTTGAAGCTGCAAGATCTTACTATTCCCAATCTTTGGATGTTCGTCGCAATGCAATCAAGGATCGTTCAAATGTTCCATCACAGATTCTAGATGTGGCAGTTTCCCTTGCAAAAGTTGCTGATGTGAACAGGAATGTTGGAAATGAGGATGTGGCCATTAATGGATTTGAAGAAGCCATAAAATTGTTGGAATCTTTGACATTAAGTTCTGAAGAAGCTGGTCTTGAGCAACGGCGCCTTTCAGTGATGGAGTTCCTGAACAAGCAGATAGCAGAAAAGACAACCTGA	1185	42.36	MCALLVTLSNLGIGTVMHYHVLLIKMTPVCPFVKAARPDDATSRKPNECPHKHQLELEGKGKKDSGDSASTKKDSVDAASISPKCPFGYDSQTFKLGPLSCMICQALLFESSKCVPCSHVYCKACISRFKDCPLCGADIEKIEADMNLQNTVDRFIEGHGRIKRPHVNTDSEEAVGDDKTVIYEDVSLERGAFLVQHAMRAFRANNVESAKSRLSICAEDIRGQLEKLGNTSELCSQLGAVLGMLGDCCRATGDADSAVTYFEESVDFLRKLPADDLEITHTLSVSLNKIGDLKYYDGDLEAARSYYSQSLDVRRNAIKDRSNVPSQILDVAVSLAKVADVNRNVGNEDVAINGFEEAIKLLESLTLSSEEAGLEQRRLSVMEFLNKQIAEKTT*	395

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi13g00847	394	ProSitePatterns	Zinc finger RING-type signature.	117	126	IPR017907	-
	Vivi13g00847	394	SUPERFAMILY	RING-U-box	95	142	-	-
	Vivi13g00847	394	Pfam	Tetratricopeptide repeat	242	266	IPR019734	GO:0005515(InterPro)
	Vivi13g00847	394	SMART	ring-2	101	135	IPR001841	-
	Vivi13g00847	394	MobiDBLite	consensus disorder prediction	38	75	-	-
	Vivi13g00847	394	MobiDBLite	consensus disorder prediction	38	71	-	-
	Vivi13g00847	394	SUPERFAMILY	TPR-like	235	367	IPR011990	GO:0005515(InterPro)
	Vivi13g00847	394	Gene3D	Tetratricopeptide repeat domain	203	380	IPR011990	GO:0005515(InterPro)
	Vivi13g00847	394	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	97	176	IPR013083	-
	Vivi13g00847	394	PANTHER	RING FINGER PROTEIN 41, 151	38	392	-	GO:0016567(PANTHER)\|GO:0061630(PANTHER)
	Vivi13g00847	394	ProSiteProfiles	Zinc finger RING-type profile.	101	135	IPR001841	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi13g00847	-	-