AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi13g00853 ATGGGAATTTTTGAAGAAATGGGTTTCTGTGGTAATCTTGATTTTCTATCGCCACCTGATGAGCCGCATATAATGATGGATCAGAAAATGTATACCTGTGAATACACTCAATGCCCCTACAACAATTACCGTCTTGCGTTTCTCGACAGGGCATCCAGAAACAATCATCAGATGAATTGTCTATACAGGAGTAATTCTTCACAAGGGTTTGGAATGTCGAATTTCCAAATTAACAATGAGAAACCAGCAGCCTTCTCTCTACCCTTTGCTCAACCCAAGGCAGCAGCTCCACCAGTGAACCAGTCTCCTGCTTTCAATGTTTCAGGACTTGGACTTCCAGAAGATGGGCAAAAAATGATTTCTGACCTAATGTCATTCTATGACACAAATCTCCAGCGAAACAAGAGCTTGAATCCTGGGAACCTTAATAAACAAACATGCCCTTAA 447 41.39 MGIFEEMGFCGNLDFLSPPDEPHIMMDQKMYTCEYTQCPYNNYRLAFLDRASRNNHQMNCLYRSNSSQGFGMSNFQINNEKPAAFSLPFAQPKAAAPPVNQSPAFNVSGLGLPEDGQKMISDLMSFYDTNLQRNKSLNPGNLNKQTCP* 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi13g00853 148 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 28 138 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi13g00853 - -
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Vivi6g00153 . 1 562 EIL Transcription Factor family AT1G73730 53.806 0.0 550.0
Vivi13g00853 . 371 495 EIL Transcription Factor family AT2G27050 38.129 1.26e-21 88.2
Vivi6g00878 . 1 355 EIL Transcription Factor family AT3G20770 53.803 1.56e-118 353.0