AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi15g00276 ATGTCCATAGCAGCAATTAAAGAATTTTACAGTGCCAAAGATGAGAATGAAGTTGCTTTGTGCATCAAAGATCTAAATTCCCCAGGCTTCTACCCATCTATGGTGTCTATTTGGGTTACAGACTCTTTTGAGAGGAAAGACAAAGAAATGGACATGCTGGCTAAGCTTCTTGTCAATCTAACAAAATCTCGGGATGCCATGTTAAGTCAAGTTCAACTAATCAAAGGATTTGAAGCTGTACTGACTGCTTTGGAGGATGCTGTAAATGATGCCCCAAAAGCAGCAGAATTTCTTGGTCGCATCTTTGCCATGGTTATCATAGAGAATGTGATTCCCTTAAGGGAGTTAGGGCAGATAATACTTGAAGGTGGAGAAGAGCCTGGTCGGCTGCGAGAAATCGGGCTTGCGGCTGAAGTTCTGGGGAGCACATTGGAGATTATCAAATCAGAGAAAGGGGAGAATGTGTTGAACGAGATTCGCAAAGTGTCCAATTTGCGGTTGGATGACTTCCGGCCTCCTGATCCTTCTTACAGATCAGCAAAATTAGATAAATTTATTTAG 561 42.25 MSIAAIKEFYSAKDENEVALCIKDLNSPGFYPSMVSIWVTDSFERKDKEMDMLAKLLVNLTKSRDAMLSQVQLIKGFEAVLTALEDAVNDAPKAAEFLGRIFAMVIIENVIPLRELGQIILEGGEEPGRLREIGLAAEVLGSTLEIIKSEKGENVLNEIRKVSNLRLDDFRPPDPSYRSAKLDKFI* 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi15g00276 186 ProSiteProfiles MI domain profile. 1 121 IPR003891 -
Vivi15g00276 186 SMART ma3-7 2 112 IPR003891 -
Vivi15g00276 186 Gene3D - 1 186 - -
Vivi15g00276 186 FunFam Eukaryotic translation initiation factor 4G 1 185 - -
Vivi15g00276 186 Pfam MA3 domain 5 112 IPR003891 -
Vivi15g00276 186 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 177 IPR045208 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER)
Vivi15g00276 186 SUPERFAMILY ARM repeat 2 175 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi15g00276 K03260 translation initiation factor 4G