Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi15g00307	ATGCACTTCAAGACTCTTCGTGATCATCTTTTCAAGATTTTGCTTGTTGGAGATTCTGGGGTTGGCAAATCATGTCTTCTTCTGAGATATGCTGATGATACATATTCTGAGGCTTACATAAGCACCATTGGAGTTGATTTTAAAATTTGCAGTATGGAGCGGGATGGGAGGAACCTTAAACTTCAAATTTGGGACACTGCAGGGCAAGAAAGATTTAGGGCCCTCACTTGCAGCTACTATCGTGGGGCACACGGTGTTATGGTGGTTTATGATGTAACAGACCAAGAGAGTTTCGATAATGTGAAGATGTGGGTGAAAGAAGTTTATTCCACGGCTGGTAAGAATGTCAACATATTTCTACTAGGAAACAAGTCTGATCTCACGGCAGATAGAGTAGTGTCATATAAAACAGCCAAGGCATTAGCTGATGAAATTGGGGCACCTTTAATGGAAATCAGTGCAAAAGATGGAAGTAATGTCCAACAGGCTTTCATAGCCATGGCTACTGCAGTCAAGGAGAGGGTGGTGAAGGAACGAGCCACGGACAATGGCAGAGACTCAGGAGTAAAAACCAGAGGAAAGCCCATTTCACAGAGCCGTAGCTGCTGCGGATCTTAA	618	43.69	MHFKTLRDHLFKILLVGDSGVGKSCLLLRYADDTYSEAYISTIGVDFKICSMERDGRNLKLQIWDTAGQERFRALTCSYYRGAHGVMVVYDVTDQESFDNVKMWVKEVYSTAGKNVNIFLLGNKSDLTADRVVSYKTAKALADEIGAPLMEISAKDGSNVQQAFIAMATAVKERVVKERATDNGRDSGVKTRGKPISQSRSCCGS*	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi15g00307	205	FunFam	Ras-related protein Rab-1B	2	176	-	-
	Vivi15g00307	205	ProSiteProfiles	small GTPase Rab1 family profile.	6	203	-	-
	Vivi15g00307	205	SMART	ran-sub-2	16	202	-	-
	Vivi15g00307	205	PRINTS	Transforming protein P21 ras signature	34	50	-	-
	Vivi15g00307	205	PRINTS	Transforming protein P21 ras signature	11	32	-	-
	Vivi15g00307	205	PRINTS	Transforming protein P21 ras signature	52	74	-	-
	Vivi15g00307	205	PRINTS	Transforming protein P21 ras signature	114	127	-	-
	Vivi15g00307	205	PRINTS	Transforming protein P21 ras signature	149	171	-	-
	Vivi15g00307	205	ProSiteProfiles	small GTPase Rho family profile.	4	176	-	-
	Vivi15g00307	205	Pfam	Ras family	12	172	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Vivi15g00307	205	ProSiteProfiles	small GTPase Ras family profile.	4	205	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Vivi15g00307	205	SMART	rho-sub-3	13	174	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Vivi15g00307	205	NCBIfam	small GTP-binding protein domain	11	164	IPR005225	GO:0005525(InterPro)
	Vivi15g00307	205	MobiDBLite	consensus disorder prediction	177	205	-	-
	Vivi15g00307	205	PANTHER	RAS-RELATED PROTEIN RAB	10	178	IPR050227	GO:0005794(PANTHER)\|GO:0016192(PANTHER)
	Vivi15g00307	205	SMART	ras-sub-4	8	174	-	-
	Vivi15g00307	205	Gene3D	-	4	196	IPR027417	-
	Vivi15g00307	205	SMART	rab-sub-5	11	174	-	-
	Vivi15g00307	205	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	8	179	IPR027417	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi15g00307	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Vivi	Vivi-Chr15:11695555	Vivi16g00273	Vivi-Chr16:5694429	dispersed
	Vivi	Vivi-Chr15:11695555	Vivi13g00258	Vivi-Chr13:2535388	transposed