AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi15g00358 ATGATAAGAACAGTTACAGCTGCTGTTGGAGCAGCACCCTCCACCCCCAGACGCACCACCACCACCACCTCCAACAATCTTCCCACCCTCCCATCATCATCATCATCCAATTCTAGGTTTCTAGCCTCAGGTAATTTCACTGCGCCCTTCAGGCGACACTGTGCTAACCGTTTGTGCCATGGTGGAGTATGCAGATGTGAGTATGTAGGTGGAAGACAAGGTGAAAGAGCAAATGAGTCTTTCATTAATCGTGTTTTTGGGCCAACCCCATCTCGATTTGAAGTCGAAAATGCCATTGCTGCGCTTCAGAGTGTTTTGCACGGGATTTCTTCATCTGGGTCAGAGTCAGATAAAAGAATAATGGAAACTCAGAGATATGGCAGAATTTATGAGGCTTTCGGCTTGCTTCAAACTGACCCATCTGTTCAGAGAATGGTGATGTCTCTGTCATCGGATAAAGCTGTTTGGGATGCTATATTGAACAACAAGATGGTGAGGAAGCTCCAGGAGCCACTCTGTACAGCTGAAGAGGAAAGTTCACAGAGCTCCAGTGAGGAACCGGACTTGGCCACATACATCTTGAGGTGGATTTTGGAGATCACCAAGGCAAAAATCATGGAACTGGTAGAGAAATTTCAGTCACTTGTGAATGAGGTGCTTCGGTCTTCTGAGAGGGAAGGATCCACCACAGAAACCACTGATCAGTTGGATGAAAAAATCATGTCATCCACTTTCCTTGCCATAGTAATCCTCTTGATCGTGGTCGTAGCTCGTGCCCAAAGCGCCTGA 789 46.89 MIRTVTAAVGAAPSTPRRTTTTTSNNLPTLPSSSSSNSRFLASGNFTAPFRRHCANRLCHGGVCRCEYVGGRQGERANESFINRVFGPTPSRFEVENAIAALQSVLHGISSSGSESDKRIMETQRYGRIYEAFGLLQTDPSVQRMVMSLSSDKAVWDAILNNKMVRKLQEPLCTAEEESSQSSSEEPDLATYILRWILEITKAKIMELVEKFQSLVNEVLRSSEREGSTTETTDQLDEKIMSSTFLAIVILLIVVVARAQSA* 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi15g00358 262 Coils Coil 198 218 - -
Vivi15g00358 262 PANTHER OS08G0179900 PROTEIN 12 259 - -
Vivi15g00358 262 MobiDBLite consensus disorder prediction 13 38 - -
Vivi15g00358 262 MobiDBLite consensus disorder prediction 1 38 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi15g00358 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr15:13153421 Vivi16g00369 Vivi-Chr16:9660439 dispersed