Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi15g00366	ATGGAAAATGGCGGGAACTCGTTTAACGGTAATAGAGGGCAGAATGGTAATAGTGGCAGCCACCTTGCATGGGATGTTCGAGACCTTGGGGCCTCCAGGTTTGACTGGAACTGCACCGGCAATTCTTTCAACGACGACGCCGCCACCGCCACTGCCACCGACGCTCCCACCCAGCCGGAGGCCGGCGTGGGTCACGCCCTGATGTTCCCTCACCAGGCCACTGCTGATGTGCACCACAACCAGTACTATCACCAACACAACCACCACCACCACCACCAGCAGTCGCTCTATGGCGGCGATGGGTCTCATCTCCACCCAGACCCACACTTGATGTGCTTGAAGCTCGGGAAGAGGCACTATTTCGAGGACTCCACGCCTGGGATCTCCACAGACAAGAGGGGTCGACCCTATTATAGTGGAGGATCGTCGCAGTCGTCGGCGACGGCTGTTTCGGTGGTGGGGTCCCCGGCGACGGTGCCGAGATGCCAGGTGGAGGGTTGCCACGTGGCGCTGGTCAATGCCAAGGACTACCACCGGAGGCATAAGGTGTGTGAGATGCATTCAAAGGCACCTAAAGTGGTAGTTCTTGGTTTAGAGCAGCGGTTTTGTCAACAGTGTAGTAGGTTTCATGCAGTGTCAGAGTTCGACGACTCAAAGAGGAGCTGCAGGAGGAGATTAGCAGGGCACAATGAGCGAAGAAGAAAGAGCTCTCATGATTCTGTTGCCAGGAACCCTTCTCAAGCAGCTAATAAATTGATGACTGGGAGATTCGCATACTTATCATCGCCGACAGGACGTGCTCTCTCTCTTCTGTCATCGAAGTCGGATTCTTGGGTTTCCTCAGCAGAACTCTCCTTAAGATCCAGTGCAGCACTCCGTGAGCTGATCGCCGAAAATCGTGCAGCCATCCTAGCTAGACAGCTTATCCTAGACCGGGACTGGCATTGGCATCACCATGGGATGGAGGATTCAGGTGGGGAGCAACCAGGATCCGATTCCCTCATGCCCCACCAGCACCAAATGTTCCCTGGGTCACGCAGCTGGGAGCGGTTCCATGAAGCCAATGGACACGTAACACTCGACCTCATGCAGGCTCCTAGCTCAGCATTTGGGTTATTGTCTGTGAGGGAGAAGTCCAAGGAAGAAGAAGAAGAATGTTCAGAGTTGTGGAACTCCCTGGAAGGAACTCATGTTCTACCAAATACATTCATATGA	1215	54.32	MENGGNSFNGNRGQNGNSGSHLAWDVRDLGASRFDWNCTGNSFNDDAATATATDAPTQPEAGVGHALMFPHQATADVHHNQYYHQHNHHHHHQQSLYGGDGSHLHPDPHLMCLKLGKRHYFEDSTPGISTDKRGRPYYSGGSSQSSATAVSVVGSPATVPRCQVEGCHVALVNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHAVSEFDDSKRSCRRRLAGHNERRRKSSHDSVARNPSQAANKLMTGRFAYLSSPTGRALSLLSSKSDSWVSSAELSLRSSAALRELIAENRAAILARQLILDRDWHWHHHGMEDSGGEQPGSDSLMPHQHQMFPGSRSWERFHEANGHVTLDLMQAPSSAFGLLSVREKSKEEEEECSELWNSLEGTHVLPNTFI*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi15g00366	404	PANTHER	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	86	334	IPR044817	GO:0003677(InterPro)
	Vivi15g00366	404	MobiDBLite	consensus disorder prediction	227	247	-	-
	Vivi15g00366	404	Pfam	SBP domain	162	235	IPR004333	GO:0003677(InterPro)
	Vivi15g00366	404	Gene3D	-	153	223	IPR036893	GO:0003677(InterPro)\|GO:0005634(InterPro)
	Vivi15g00366	404	FunFam	Squamosa promoter-binding-like protein 14	153	223	-	-
	Vivi15g00366	404	SUPERFAMILY	SBT domain	160	241	IPR036893	GO:0003677(InterPro)\|GO:0005634(InterPro)
	Vivi15g00366	404	ProSiteProfiles	Zinc finger SBP-type profile.	159	236	IPR004333	GO:0003677(InterPro)
	Vivi15g00366	404	MobiDBLite	consensus disorder prediction	124	146	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi15g00366	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Vivi	Vivi-Chr10:1346397	Vivi15g00366	Vivi-Chr15:13245041	dispersed
	Vivi	Vivi-Chr11:13588595	Vivi15g00366	Vivi-Chr15:13245041	dispersed
	Vivi	Vivi-Chr12:4108297	Vivi15g00366	Vivi-Chr15:13245041	dispersed
	Vivi	Vivi-Chr15:13245041	Vivi1g00011	Vivi-Chr1:230334	dispersed
	Vivi	Vivi-Chr15:13245041	Vivi15g00367	Vivi-Chr15:13256865	tandem

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi15g00366	.	125	249	SPL gene family	AT1G27370	55.2	4.88e-39	142.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Vivi	SBP	8.3e-32	No_clan		TF	SBP