Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi15g00414 | ATGAAATTCGGGAAGAGATTGAAGCAACAAATTCAGGAAACGTTGCCTGATTGGCGCGATAAATTCCTGGCCTACAAGGATTTGAAGAAGCTGGTGAAGTTGGTTTCGTCTCCTCCGGCGGTGGCGAATGGATCGGCGGCGAAAGCCGAGGCTGAGTTTGTGTACTTGTTGAATAATGAGATCGAGAAGTTTAATGCATTTTTCATGGAGCAGGAGGAGGATTTCATTATCAGGAATAAGGAATTACAACAGAGGATCCAGAGGGTGATCGATAAATGGGGGCTCAATGGCAGCCACCCTTCAGACACAAACTATAGAGAGGAAATGGGAAAGATCAGAAAAGATATAGTTGATTTCCATGGCGAAATGGTACTCCTAGAGAACTACAGCAATATCAATTACACAGGCTTGGCTAAGATCTTGAAGAAGTATGACAAAAGAACTGGTGGGCTGTTGCGCTTGCCCTTCATTCAGAAGGTGTTACAGCAGCCTTTCTTTACAACTGACCTTGTCTCAAAGCTGGTCAAGGAATGTGAAAGCACCATAGATGCAGTGTTCCCAGCTGCGAAAGAAGAAGGTGGTGTCCATGAAAGAGAACAAGAAGCAATAACAGTGGTTGGTGAAGGAATTTTCAGGAACACAGTTGCAGCACTATTGACGTTGCAGGAGATAAGAAGAGGAAGCTCCACCTACAGTCACTTCTCTCTGCCTCCTCTCATTTTGCCAGACCCTGATCTCATTCAATCCATTCAATTCCACTCTCCCATCCCCATTGTCTGA | 780 | 45.0 | MKFGKRLKQQIQETLPDWRDKFLAYKDLKKLVKLVSSPPAVANGSAAKAEAEFVYLLNNEIEKFNAFFMEQEEDFIIRNKELQQRIQRVIDKWGLNGSHPSDTNYREEMGKIRKDIVDFHGEMVLLENYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLQQPFFTTDLVSKLVKECESTIDAVFPAAKEEGGVHEREQEAITVVGEGIFRNTVAALLTLQEIRRGSSTYSHFSLPPLILPDPDLIQSIQFHSPIPIV* | 260 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi15g00414 | 259 | PANTHER | SPX DOMAIN-CONTAINING PROTEIN 3 | 1 | 243 | IPR031142 | GO:0016036(InterPro) | |
| Vivi15g00414 | 259 | Pfam | SPX domain | 1 | 36 | IPR004331 | - | |
| Vivi15g00414 | 259 | Pfam | SPX domain | 100 | 159 | IPR004331 | - | |
| Vivi15g00414 | 259 | ProSiteProfiles | SPX domain profile. | 1 | 158 | IPR004331 | - | |
| Vivi15g00414 | 259 | CDD | SPX-AtSPX1-like | 2 | 147 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi15g00414 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr11:4657020 | Vivi15g00414 | Vivi-Chr15:14297501 | dispersed | |
| Vivi | Vivi-Chr14:29765355 | Vivi15g00414 | Vivi-Chr15:14297501 | dispersed | |
| Vivi | Vivi-Chr15:14297501 | Vivi9g00534 | Vivi-Chr9:6631424 | dispersed | |
| Vivi | Vivi-Chr15:14297501 | Vivi4g00476 | Vivi-Chr4:4847963 | transposed |