AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00268 ATGGTTTATACTGGTCGAATTTTGGCGGTTTCGTACTCTCCAACGACGTCTTATCGGTACTCAAACTCCAGATTTCATCAAGGAAAGCTCAAATCGGATCTGAAATGGCGAGCCATGGTGTCTGGGCCGGAGGCTTCTGCTTTTGCACCTTCGGTCGATTCCGAATCTGCTGATAAAAACGACACTGGCTTTTGTATTATTGAAGGACCTGAAACAGTTCAGGATTTTGCCAAAATGGAACTGCAAGAAATTCAGGATAATATTCGAAGTCGGAGAAACAAAATTTTCTTGCATATGGAGGAGGTTCGCAGGCTGAGGATACAACAAAGAATTAAAAATGCTGAACTTGGAATTCTAAAAGAACAGGAAAATGAACTCCAAAATTTTCCATCATTCATTCCATTTTTGCCTCCTTTGAGTTCAGCAAATCTGAAACTGTACTATGCTGCTTGTTTCTCTCTTCTTGCTGGGATCATCATTTTTGGTGGCTTACTTGCACCTACTCTGGAGCTTAAGTTGGGATTAGGTGGCACATCATATGAAGATTTTATCCGCAGTGTGCATCTTCCAATGCAGTTGAGTCAGGTAGATCCTATAGTGGCATCTTTCTCTGGAGGGGCAGTTGGAGTGATCTCATCCTTGATGATTGTTGAAATAAACAACGTAAAACAGCAGGAGAAAAAAAGATGCAAATACTGTCTTGGAACTGGATACCTTGCATGTGCCCGCTGTTCAAGCTCGGGAGCGCTTGTTCTTAGTGAACCTGTCTCAACAGTCAATGGTGGAAGACAGCCTCTATCACCTCCTAAAACCGAAAGATGTTCAAACTGTTCAGGAGCAGGAAAGGTCATGTGCCCCACATGCCTCTGTACTGGGATGGAAATGGCGAGCGAGCATGATCCACGAATAGATCCCTTTGACTAG 924 43.4 MVYTGRILAVSYSPTTSYRYSNSRFHQGKLKSDLKWRAMVSGPEASAFAPSVDSESADKNDTGFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGILKEQENELQNFPSFIPFLPPLSSANLKLYYAACFSLLAGIIIFGGLLAPTLELKLGLGGTSYEDFIRSVHLPMQLSQVDPIVASFSGGAVGVISSLMIVEINNVKQQEKKRCKYCLGTGYLACARCSSSGALVLSEPVSTVNGGRQPLSPPKTERCSNCSGAGKVMCPTCLCTGMEMASEHDPRIDPFD* 308
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00268 307 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 45 296 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00268 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr16:5421949 Vivi8g00960 Vivi-Chr8:17064122 dispersed
Vivi Vivi-Chr16:5223827 Vivi16g00268 Vivi-Chr16:5421949 proximal