Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi16g00275	ATGGTGAAGGAATCTGTGAGAAAGTGTTCTCATTGTGGGAACAATGGGCACAACTCAAGAACATGCAGCGCTGGTGGAAAGGGGTGTTTGAAGCTTTTTGGGGTGCAGATTTTGACAGAGAAAGAAGATGAAGCCATGAGGAAGAGCTTGAGCATGGGGAATTTGCAGTCATGCAATATCGAACACCATCATGGCGATGCCGGGTATCTATCAGATGGGCTTCTTCAATCCAGGAGAGGCAAGCAAAAATATATAGAAATCGGAGATTTTTCGTCATATGAATGGATTTCTGTTTGTTTTTGTTTAGGGGTGCCATGGTCGGAGGAAGAGCATCGGACTTTTCTGGCTGGATTGGAGAAGCTGGGAAAAGGGGATTGGAGAGGGATCGCAAAAAAATTTGTGACCACCAGGACTCCAACCCAGGTTGCTAGCCATGCCCAGAAATATTTTCTCCGGCGAGCTGCCTGTGATAAAAGGAAACGCAGGCCAAGCCTCTTTGACATGCCTCTGGATCCTGTACTGCTCCATCTCTCTCGAAACCGAAACCATTTGGCATAA	558	46.77	MVKESVRKCSHCGNNGHNSRTCSAGGKGCLKLFGVQILTEKEDEAMRKSLSMGNLQSCNIEHHHGDAGYLSDGLLQSRRGKQKYIEIGDFSSYEWISVCFCLGVPWSEEEHRTFLAGLEKLGKGDWRGIAKKFVTTRTPTQVASHAQKYFLRRAACDKRKRRPSLFDMPLDPVLLHLSRNRNHLA*	186

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi16g00275	185	ProSiteProfiles	Zinc finger CCHC-type profile.	7	22	IPR001878	GO:0003676(InterPro)\|GO:0008270(InterPro)
	Vivi16g00275	185	SUPERFAMILY	Homeodomain-like	104	152	IPR009057	-
	Vivi16g00275	185	SMART	sant	102	152	IPR001005	-
	Vivi16g00275	185	FunFam	transcription factor MYB1R1	104	155	-	-
	Vivi16g00275	185	Gene3D	-	104	154	-	-
	Vivi16g00275	185	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	105	154	IPR017930	-
	Vivi16g00275	185	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	104	152	IPR006447	GO:0003677(InterPro)
	Vivi16g00275	185	Pfam	Myb-like DNA-binding domain	104	150	IPR001005	-
	Vivi16g00275	185	CDD	SANT	105	150	IPR001005	-
	Vivi16g00275	185	ProSiteProfiles	SANT domain profile.	106	154	IPR017884	-
	Vivi16g00275	185	ProSiteProfiles	Myb-like domain profile.	105	150	IPR001005	-
	Vivi16g00275	185	PANTHER	TRANSCRIPTION FACTOR KUA1	7	168	IPR052245	GO:0009723(PANTHER)\|GO:0009739(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi16g00275	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Vivi	Vivi-Chr16:5714744	Vivi4g00070	Vivi-Chr4:773916	dispersed
	Vivi	Vivi-Chr16:5714744	Vivi11g00200	Vivi-Chr11:1948503	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Vivi	Myb_DNA-binding	3.6e-12	CL0123		TF	MYB-related