AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00415 ATGGACGCTCAGAGAGCTCTTCTAGACGAGCTCATGGGTGCAGCGAGAAACCTGACGGAAGAAGAGAAAAAAGGGTACAAGGAGGTTACTTGGGATGATAAGGAGGTTTGTGGATTCTATATGGTGCGGTTTTGTCCTCATGATCTCTTCGTCAACACTCGAAGTGATCTCGGACCATGCCCTAGAATTCATGATCAAAAGTTGAAAGAAAGTTTTGAAAAGTCTCCAAGACATGATTCATATGTGCCTCGCTTTGAAGCTGAGCTTTCTCAGTTTTGTGAGAAATTGGTTATGGACTTGGATAGAAGAGTGAGGCGTGGGCGTGAACGCCTTGCCCAAGAGGTGGAAGCAGCCCCACCTGCTCCACTTTCACTGGAGAAATCTGAGCAATTATCTGTGTTAGAGGAAAAAATAAAGAATCTGTTGGAACAAGTTGAGGCCCTTGGTGAAGCTGGCAAGGTGGATGAGGCTGAAGCACTCATGAGGAAGGTGGAGATGCTGAATGCTGAGAAGACAGTCTTGACTCAACAACCCCAGAATGACAAAGTCCTAATGCTTGCACAGGAGAAAAAGATGGCTCTGTGTGAAACCTGTGGTTCTTTTCTGGTAGCAAATGATGCTGCAGAGAGGACTCAGTCTCATGTCACAGGAAAGCAGCATATTGGTTATGGCATGGTTCGGGATTTCATCACTGAGTACAAGGAAGCCAAGGAGAAGGCAAGGGAAGAAGAAAGATTAAAGAGGGAGAAAGAAGCTGAAGAGAGGAGAAAGCAGAGAGAGAAGGAATCTGAGAGCAGAAGTCGAAGAGCTGATTCTGGTGATAGGGACAGGACTCGTGACCGAGATAGAGACAGGGAGCGGGATCGATACAGAGAACGAGAACGGGATCGTGAAAGGCCTCGAGAGTGGAATGATGGAGGCAGGGATAGGTACCGTGATCGGAGCAGGTCACGTTCCCCTGTTAGGCATAGCCACAGGAGGTCCCCTCAAAGTCCAGTTCGGCCATATTAG 1011 47.87 MDAQRALLDELMGAARNLTEEEKKGYKEVTWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDQKLKESFEKSPRHDSYVPRFEAELSQFCEKLVMDLDRRVRRGRERLAQEVEAAPPAPLSLEKSEQLSVLEEKIKNLLEQVEALGEAGKVDEAEALMRKVEMLNAEKTVLTQQPQNDKVLMLAQEKKMALCETCGSFLVANDAAERTQSHVTGKQHIGYGMVRDFITEYKEAKEKAREEERLKREKEAEERRKQREKESESRSRRADSGDRDRTRDRDRDRERDRYRERERDRERPREWNDGGRDRYRDRSRSRSPVRHSHRRSPQSPVRPY* 337
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00415 336 Coils Coil 157 177 - -
Vivi16g00415 336 Coils Coil 124 151 - -
Vivi16g00415 336 MobiDBLite consensus disorder prediction 238 336 - -
Vivi16g00415 336 Pfam LUC7 N-terminus 2 250 IPR004882 GO:0003729(InterPro)|GO:0005685(InterPro)|GO:0006376(InterPro)
Vivi16g00415 336 Coils Coil 226 263 - -
Vivi16g00415 336 Coils Coil 1 21 - -
Vivi16g00415 336 MobiDBLite consensus disorder prediction 238 316 - -
Vivi16g00415 336 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 327 IPR004882 GO:0003729(InterPro)|GO:0003729(PANTHER)|GO:0005685(PANTHER)|GO:0005685(InterPro)|GO:0006376(InterPro)|GO:0006376(PANTHER)|GO:0071004(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00415 K13212 RNA-binding protein Luc7-like 2