AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00425 ATGGCGGAGATCAAAGAAGGGAAAGCTAAAAAGAAAAGAGAGGAGAAGGTAGTGGAAAAGAACTACAAATGGACGGCTGAGATTAAGGGGAAAGGAGATGAGGCTCCGATCCTGCGGACGTACACGTGGAAAGTATCGAGTGGCGCGGCAGGGGAGTGCAGTGGAGTTGTGAAAGAGAAGAAAAAGGAGAAATGTAAGAAAGAGCTGGGAAGGACGCGTGTGGTGGAGATTGAAGAGGCTGCTGATAATGGGGCTGTGGTTTTAAGACAGGCCTTTGCCAAGAGAGTTGGAGCTGTGAAAAGCAAGGGAAAGAAAAAGGAATTGTCGCCACAAGATGCAGCAATTATGATCCAAATGAGCTTCAGAGCTTATCTGATACGTAGATCTCAGGCTCTTCGTGCCCTTCGAGAGCTGGCAGTTGCTAAGGCCAAGTTGAAGGAGATCAGAGTATTGTTTAACAACTATCGCCGTCGTGTAACTGATGATGCAGAGGAGCGCCAGAGGATCTCTGAGAAGATCATTGTCCTGCTCATACATGTAGATGATATTGAGGGAGCTGATCTCATGGTGCGAGCTGCAAAGAGGTCAATAGTGGACGAGCTGGAAGCAATGCTTGAGGTGGTGGACCCTCTGCCTCCTGGGAGGACTCTTTCAATGAGGAGGAGGATGTTTGATATGCCCAGTCGTGTCATTCAGAAGGAACTTGCTGAAGGTGTGGCACAGGTTGTCCAAATGCTAGATCAAGAAGAGAATGGTGCTGCCTTCGAGGCATGCTTGTAA 780 48.46 MAEIKEGKAKKKREEKVVEKNYKWTAEIKGKGDEAPILRTYTWKVSSGAAGECSGVVKEKKKEKCKKELGRTRVVEIEEAADNGAVVLRQAFAKRVGAVKSKGKKKELSPQDAAIMIQMSFRAYLIRRSQALRALRELAVAKAKLKEIRVLFNNYRRRVTDDAEERQRISEKIIVLLIHVDDIEGADLMVRAAKRSIVDELEAMLEVVDPLPPGRTLSMRRRMFDMPSRVIQKELAEGVAQVVQMLDQEENGAAFEACL* 260
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00425 259 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 18 249 IPR040400 GO:0006457(PANTHER)|GO:0009506(PANTHER)
Vivi16g00425 259 ProSiteProfiles IQ motif profile. 111 139 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00425 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr16:11982872 Vivi19g00899 Vivi-Chr19:15646369 dispersed