Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi16g00429 | ATGGAGTTTCTTGGGCACTCAACGTGGGTTCTTGTGCACATTGCGCTCTTCTCTGGCCTCTGTTTCGCTGCAGACCCATTTGTGAATTTCGAGCTGACCTACTCTTTTATCACTGCTTCTCCTTTGGGTGTTCCCCAGCAGGTTATAGCAGTTAATGGAAATTTTCCAGGTCATCCTTTGAATGTTACAACAAATAACAATGTTGTTGTTAATGTGACAAACAAATTGAATGAAGACCTCTTGATCACTTGGCCAGGGGTACAAATGCGCCGTAATTCTTGGCAAGATGGTGTTCTAGGCACAAATTGCCCTATACCATCTAACAGGAAGTGGGATTACCAGTTTCAGGTTAAGGATCAGATTGGCAGTTTCTTCTACTTCCCATCTCTCAATTTTCAGAGAGCAGCTGGTGGCTTTGGGTCATTTATTATTACTAACAGACCAGTTATCTCACTGCCTTTCGCAGCCCCAGATGGGGATATCATACTCCTCATTGGTGACTGGTACACACAAAACCATACGGCTCTGCGGCAGACCCTTAATGCTGGAAAAGACCTTGGGATGCCAGATGGAGTTCTCATCAATGGGAAGGGACCTTACAGATACAACACTACTCTTGTACCAGATGGAATAGCATATGAAACAGTTTCAGTTGAGCCAGGAAAAACTTATCGAGTTCGGGTTCACAATGTTGGAATCTCCACTAGTCTGAACTTCAGAATTCAGAACCATAATATGCTTCTAGTGGAAACAGAGGGACATTACACATCACAACAAAACTATAGTAACTTAGATATTCATGTTGGGCAGTCTTACACCTTTTTAGTTACCATGGATCAAAATGCAAGTACCGATTACTACATTGTGGCCAGTGCCAGGTTTGTGAATGAGTCACTTTGGCAAAGAGTTACTGGTGTCGCTGTGTTGCAGTACTCCAATTCTAAAGGAGCTGCAACTGGTCCTCTCCCTCCTGGGCCAGATGACTTGTATGACAAGACATTTTCAATGAACCAAGCAAGATCTATCAGGCAAAATGTATCTGCAAGTGGAGCTCGTCCTAACCCACAGGGGTCTTTTCACTATGGTTCAATCAATGTGACTGATACATATGTGTTAAGGAGCATGCCACTAGTGACAATTAACAACACACTTAGGGCTACATTTAATGGGATCTCATTTGTCAATCCCGAGACACCAATCAGGCTGGCTGACCAGCATAAAGTTAAGGGAGCTTACAAGCTTGATTACCCGAAAAAGCCTCTTACAGGAGCACCAAAACTTGATATATCTGTTATCAATGGTACATATAAGGGGTTTATAGAAGTTATATTGCAGAACAATGATACAATAATGCAGAGCTTCCACATGGATGGTTATTCATTTTTTGTGGTCGGGATGGATTATGGTAACTGGACAGAAAGCAGTAGGGGCACATACAATAAGTGGGATGCGATTGCTCGCTGCACAGCACAGGTTTTCCCTGGGGCATGGACAGCAGTGTTAATCTCTCTTGACAATGCTGGAGCATGGAATCTTAGAGTAGAAAACCTTGACAGATGGTATCTGGGCCAAGAAACATACATGAGAATCGTCAATCCTGAGGAAAATGGTGAAACAGAGTTTTCTGCTCCCAGTAATATTTTGTATTGTGGCGCTCTTAAGAATTTGCAAGGAAGCCAGAATTCAAGTAATGCTCCAATGTTGATCACCGGGTGGAAACTGAAGCTGTTTTTCACACTACTGCTGACACTATCTGCTGCCATTTCCATATCCTGCTAA | 1779 | 42.95 | MEFLGHSTWVLVHIALFSGLCFAADPFVNFELTYSFITASPLGVPQQVIAVNGNFPGHPLNVTTNNNVVVNVTNKLNEDLLITWPGVQMRRNSWQDGVLGTNCPIPSNRKWDYQFQVKDQIGSFFYFPSLNFQRAAGGFGSFIITNRPVISLPFAAPDGDIILLIGDWYTQNHTALRQTLNAGKDLGMPDGVLINGKGPYRYNTTLVPDGIAYETVSVEPGKTYRVRVHNVGISTSLNFRIQNHNMLLVETEGHYTSQQNYSNLDIHVGQSYTFLVTMDQNASTDYYIVASARFVNESLWQRVTGVAVLQYSNSKGAATGPLPPGPDDLYDKTFSMNQARSIRQNVSASGARPNPQGSFHYGSINVTDTYVLRSMPLVTINNTLRATFNGISFVNPETPIRLADQHKVKGAYKLDYPKKPLTGAPKLDISVINGTYKGFIEVILQNNDTIMQSFHMDGYSFFVVGMDYGNWTESSRGTYNKWDAIARCTAQVFPGAWTAVLISLDNAGAWNLRVENLDRWYLGQETYMRIVNPEENGETEFSAPSNILYCGALKNLQGSQNSSNAPMLITGWKLKLFFTLLLTLSAAISISC* | 593 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi16g00429 | 592 | Gene3D | - | 24 | 146 | IPR008972 | - | |
| Vivi16g00429 | 592 | Pfam | Multicopper oxidase | 399 | 534 | IPR011706 | GO:0005507(InterPro)|GO:0016491(InterPro) | |
| Vivi16g00429 | 592 | SUPERFAMILY | Cupredoxins | 379 | 550 | IPR008972 | - | |
| Vivi16g00429 | 592 | SUPERFAMILY | Cupredoxins | 21 | 174 | IPR008972 | - | |
| Vivi16g00429 | 592 | FunFam | Monocopper oxidase-like protein | 363 | 561 | - | - | |
| Vivi16g00429 | 592 | Pfam | Multicopper oxidase | 38 | 147 | IPR011707 | GO:0005507(InterPro) | |
| Vivi16g00429 | 592 | PANTHER | MULTI-COPPER OXIDASE | 29 | 535 | IPR045087 | GO:0016491(PANTHER)|GO:0046658(PANTHER) | |
| Vivi16g00429 | 592 | Pfam | Multicopper oxidase | 160 | 314 | IPR001117 | - | |
| Vivi16g00429 | 592 | Gene3D | - | 158 | 351 | IPR008972 | - | |
| Vivi16g00429 | 592 | SUPERFAMILY | Cupredoxins | 154 | 353 | IPR008972 | - | |
| Vivi16g00429 | 592 | Gene3D | - | 363 | 562 | IPR008972 | - | |
| Vivi16g00429 | 592 | FunFam | Monocopper oxidase-like protein | 158 | 351 | - | - | |
| Vivi16g00429 | 592 | FunFam | Monocopper oxidase-like protein SKU5 | 22 | 146 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi16g00429 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr16:12077244 | Vivi2g00496 | Vivi-Chr2:4870557 | dispersed | |
| Vivi | Vivi-Chr16:12077244 | Vivi12g00386 | Vivi-Chr12:5574793 | transposed |