AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi16g00437 ATGCAGCAGAGGAAATCTGCTTCTTCCTTTGGGAGGCCATCGGGAACTGATGGTTCCGATTTCTCCTATCGCATGGTGGTTGACTCAAGGTATACGAAGGTAGCTAAAGGAAAATCTCGTCTCCATGTGTTGATCATTGCTCAGGCTATCATTCATTTGATAGGTGGGCTGAGCAGATTTTTATTATCAACCTCGAAGGAGGGTCCTGATAAGCTTGCTATTGCAACGGTTGCTCTTGGTTTCATTTCTCTTGTAATTGGCGAATTGGGCCAAAGACGCAGCCGAGAGAATTTTCTGAGATTGTACATGATCACATCATCTATTGCGTTTCTTCTCTCAACTGCTTTTGTTGTTCAGAAAAATTCATTAATAGAGGTTCTCCAAGACATGAGTGGCGGGGAAATGAAGTTGTTTGAACTTCTTGAAATTGGTTATGTTGTGCTCGGGTTTCTTCTACAGATATCTACAATTAGTACGATAATCACTCTTATCTGGAACATGTCCCCACCCAAGAAAGCTTCTTGA 525 42.1 MQQRKSASSFGRPSGTDGSDFSYRMVVDSRYTKVAKGKSRLHVLIIAQAIIHLIGGLSRFLLSTSKEGPDKLAIATVALGFISLVIGELGQRRSRENFLRLYMITSSIAFLLSTAFVVQKNSLIEVLQDMSGGEMKLFELLEIGYVVLGFLLQISTISTIITLIWNMSPPKKAS* 175
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi16g00437 174 Pfam Jagunal, ER re-organisation during oogenesis 12 54 IPR009787 GO:0005789(InterPro)|GO:0007029(InterPro)
Vivi16g00437 174 PANTHER UNCHARACTERIZED 1 174 IPR009787 GO:0005789(InterPro)|GO:0005789(PANTHER)|GO:0007029(PANTHER)|GO:0007029(InterPro)|GO:0016192(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi16g00437 K25789 protein jagunal