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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00899 ATGAGTCTAATCTCAGCACTAAAAATAAAGAAAAAGGAATTTTCACCACAAGATGCAGTAATTATGGTCCACATGAGTCTCAGAGCTTATCTGATACGTAGATCTCAGGCTCTTCATGCCCTTCGAGACCTGGCAGTCGCTAAGGCCAAGTTGAAGGAGATCAGAGTATTGTTTAACAATTGTCGCCATCGTGTAACTGATGATGCAGAGGAGCGCCAGAGGATCTTTGAGAAGATCATGGTCCTGCTCATACATGTAGATGATATTAAGGGAGCTGATCCATGGTGTAAGAATTATAATCTCCACCCAAAAGAGACGCGACTGCAAGCGACAAATGAGGTTGACTGGTCTTGTGGCAGGCAGTAA 366 43.72 MSLISALKIKKKEFSPQDAVIMVHMSLRAYLIRRSQALHALRDLAVAKAKLKEIRVLFNNCRHRVTDDAEERQRIFEKIMVLLIHVDDIKGADPWCKNYNLHPKETRLQATNEVDWSCGRQ* 122
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00899 121 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 8 99 IPR040400 GO:0006457(PANTHER)|GO:0009506(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00899 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr16:11982872 Vivi19g00899 Vivi-Chr19:15646369 dispersed
Vivi Vivi-Chr19:15646369 Vivi19g00900 Vivi-Chr19:15663551 tandem