Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g00905 | ATGCACCTTCCCATATCTAACAATGCTAAGGATTTCTATGCAAGAGTTGGGAAATCTTGGAAGCAGGGTTACCTCCTTTATGGCCTTCCTGGGATGGGAAAATCTACCATGATTGCTGCCATGGAGAATATGTTGTTGTACGACATCTATGATCTTGAACTAATGGTGGTCGGTGACAACACCGAGCGGCCGAGGAGGAAGAGAAAGACCCCATTAAAGATAAAGCGAAGGTAG | 234 | 45.3 | MHLPISNNAKDFYARVGKSWKQGYLLYGLPGMGKSTMIAAMENMLLYDIYDLELMVVGDNTERPRRKRKTPLKIKRR* | 78 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g00905 | 77 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 9 | 52 | IPR027417 | - | |
| Vivi19g00905 | 77 | Gene3D | - | 2 | 70 | IPR027417 | - | |
| Vivi19g00905 | 77 | PANTHER | BCS1 AAA-TYPE ATPASE | 8 | 62 | IPR050747 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g00905 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr19:16043352 | Vivi9g01044 | Vivi-Chr9:21779346 | dispersed | |
| Vivi | Vivi-Chr4:18902110 | Vivi19g00905 | Vivi-Chr19:16043352 | dispersed | |
| Vivi | Vivi-Chr19:16043352 | Vivi3g00354 | Vivi-Chr3:3303133 | transposed |