Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g00912 | ATGGAAAGTAATAAGTCAATATATTGCTATCTTTATTTTGGAGGGGAGATCATAAAGGCTGACGATGGGTCCATCAATTATAAAGGTGGATGTACTAATGGCATATGTATTAATCAAGGAATCTCACATGCTGAGTTTGTTTCTAAAGCAAGTAAGAAAGTCCAAATTGACCCATCTAGTCTGTCATTTAAGTGCACCTTGAAGTTTGATAAATCTTTACTCCAGCCATTGGATGACGATGATGACATATATAACATGGTCCTCTTCAATGACGGTTTCTCAAGAGTCTATGTATTTGAAGCTCATAACGGAAGAGTAAAGCAAGGAGTAATAGATGAACAAAGCACTTCTGTTAATGTGGAAAACAATCATTTTTCATCGCCATCATCATCATCTCAAGGTGTAAATGATGATAACACCATTCAGAGACATGAAGTTGTATCAAGATGCATAGAGTTTGAAGCAATTCCTCCAGTTTCAAGTACTCTTGGAAAGGCTATATCAGGTAGTGGGCAAATTTTTACAAATGCTGATGAATTCCGGAATGCACTATACCTTACCTCCTTAGCTGGACGATTCAACTACAAGTTCAAGAGGAATTCTTTAAAGCAGATGACTGCATGTTGCACAGCTGGTGGATGTCCTTGGAAGATAACTGCTCGTGGTGTTGGGGCTACCAAAATTGTGAGAGTGCACACATTTGAAAACAAACATAATCACTCTGCACAGGAGGAGTCTTCATCAGTGCCTGCATTACGACCAAATAAAGCGGCACTTGTAATTGATGATATGATAAGGGCTAACCCTGATTACCTGCCCCGTCAAATCTGTGAAGATTTTGAAAGGCAACATGGAGTGAAATTGACCTACAATCAAGCTTGGAAATGTAAAGAGAAGGCGAAGGAGAGAATATTTGGTCTTCCACACAATTCATATAAGTTGCTGCCCTGGTTATGTAAGCAGTTAATGGAAACTAATTCTGGGACAATTGCTGAATGGACTTCCTCAGACAAAGGTAATTTCATGCAATTGTTCATTGCACATGGATTTTCTGTGCATGGGTTTTTAATGGGATGCCGACCTATCATATCCATTAACTCATCCAACTTGAGTGGGCCACACAAAGGTGCTTTGTTTTCAGCCTTGGCATATGATGCTGATGATGACATGTTTCCATTAGCATATGCCATTGTGAGTTCGGAAAATTATTATAACTGGTTTTGGTTCTTACAGAGGCTAAAGCAGTTGGTTGGTGAAATGGAGGTGGTCATCATTTCTGGAAGGCATCATGCGATTATTCGTAGTGTTGCAGAGGTTTTTGGAGTTGAAAACCATGCATATTGTCTTCGTCATCTAAAGGAGGACTTTAGCCACCAGTTGATGATGGGAAGGGAAGGTAAAGATAACGCTCTAAAACTACTTGATGCTGTTGCATATGCAAGGTTAGAAATTGGTTACAACAGTGCAATGGAGAACTTAAGGAGATTTGATGCTAACTTAGCCAAATGGGTTGAAGATAACAATCCTGAACACTGGGCGATGTCAAAGTTCCCTAAAAAGCGTTGGGACAAAATGAATACTAATATCTTTGGGTCAATTAGTGCTTGGGTCAAAGAAGAACAACATCACACAATATTTAGTTTCATTGAGAAGCACATGGATATGCTAGCCTCTTTGTTAGTTGAATGTAAAACCACAATGCAGAGTTGGGAAAGATCCATTGGCCCAAAAACTGAGGATAAACTCTTGCATAACATTGCCAAAAGCAAAACAGTTTCAGATGGGAAGGCAAAGATAAGCAATTATGAAATTGATCTATTAGTTGTTCTTCAGTATGTTTGTCATGGAAGTTTGAACTGTTTTTTATTACTCTTTCCCCTAGTTTTGTTTGGGAAGAAATTTTAA | 1905 | 38.64 | MESNKSIYCYLYFGGEIIKADDGSINYKGGCTNGICINQGISHAEFVSKASKKVQIDPSSLSFKCTLKFDKSLLQPLDDDDDIYNMVLFNDGFSRVYVFEAHNGRVKQGVIDEQSTSVNVENNHFSSPSSSSQGVNDDNTIQRHEVVSRCIEFEAIPPVSSTLGKAISGSGQIFTNADEFRNALYLTSLAGRFNYKFKRNSLKQMTACCTAGGCPWKITARGVGATKIVRVHTFENKHNHSAQEESSSVPALRPNKAALVIDDMIRANPDYLPRQICEDFERQHGVKLTYNQAWKCKEKAKERIFGLPHNSYKLLPWLCKQLMETNSGTIAEWTSSDKGNFMQLFIAHGFSVHGFLMGCRPIISINSSNLSGPHKGALFSALAYDADDDMFPLAYAIVSSENYYNWFWFLQRLKQLVGEMEVVIISGRHHAIIRSVAEVFGVENHAYCLRHLKEDFSHQLMMGREGKDNALKLLDAVAYARLEIGYNSAMENLRRFDANLAKWVEDNNPEHWAMSKFPKKRWDKMNTNIFGSISAWVKEEQHHTIFSFIEKHMDMLASLLVECKTTMQSWERSIGPKTEDKLLHNIAKSKTVSDGKAKISNYEIDLLVVLQYVCHGSLNCFLLLFPLVLFGKKF* | 635 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g00912 | 634 | PANTHER | POLYPROTEIN, PUTATIVE-RELATED | 166 | 590 | - | - | |
| Vivi19g00912 | 634 | Pfam | MuDR family transposase | 169 | 225 | IPR004332 | - | |
| Vivi19g00912 | 634 | Pfam | MULE transposase domain | 373 | 453 | IPR018289 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g00912 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr19:12834089 | Vivi19g00912 | Vivi-Chr19:16375070 | dispersed | |
| Vivi | Vivi-Chr19:16375070 | Vivi3g00191 | Vivi-Chr3:1904172 | dispersed |