AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00912 ATGGAAAGTAATAAGTCAATATATTGCTATCTTTATTTTGGAGGGGAGATCATAAAGGCTGACGATGGGTCCATCAATTATAAAGGTGGATGTACTAATGGCATATGTATTAATCAAGGAATCTCACATGCTGAGTTTGTTTCTAAAGCAAGTAAGAAAGTCCAAATTGACCCATCTAGTCTGTCATTTAAGTGCACCTTGAAGTTTGATAAATCTTTACTCCAGCCATTGGATGACGATGATGACATATATAACATGGTCCTCTTCAATGACGGTTTCTCAAGAGTCTATGTATTTGAAGCTCATAACGGAAGAGTAAAGCAAGGAGTAATAGATGAACAAAGCACTTCTGTTAATGTGGAAAACAATCATTTTTCATCGCCATCATCATCATCTCAAGGTGTAAATGATGATAACACCATTCAGAGACATGAAGTTGTATCAAGATGCATAGAGTTTGAAGCAATTCCTCCAGTTTCAAGTACTCTTGGAAAGGCTATATCAGGTAGTGGGCAAATTTTTACAAATGCTGATGAATTCCGGAATGCACTATACCTTACCTCCTTAGCTGGACGATTCAACTACAAGTTCAAGAGGAATTCTTTAAAGCAGATGACTGCATGTTGCACAGCTGGTGGATGTCCTTGGAAGATAACTGCTCGTGGTGTTGGGGCTACCAAAATTGTGAGAGTGCACACATTTGAAAACAAACATAATCACTCTGCACAGGAGGAGTCTTCATCAGTGCCTGCATTACGACCAAATAAAGCGGCACTTGTAATTGATGATATGATAAGGGCTAACCCTGATTACCTGCCCCGTCAAATCTGTGAAGATTTTGAAAGGCAACATGGAGTGAAATTGACCTACAATCAAGCTTGGAAATGTAAAGAGAAGGCGAAGGAGAGAATATTTGGTCTTCCACACAATTCATATAAGTTGCTGCCCTGGTTATGTAAGCAGTTAATGGAAACTAATTCTGGGACAATTGCTGAATGGACTTCCTCAGACAAAGGTAATTTCATGCAATTGTTCATTGCACATGGATTTTCTGTGCATGGGTTTTTAATGGGATGCCGACCTATCATATCCATTAACTCATCCAACTTGAGTGGGCCACACAAAGGTGCTTTGTTTTCAGCCTTGGCATATGATGCTGATGATGACATGTTTCCATTAGCATATGCCATTGTGAGTTCGGAAAATTATTATAACTGGTTTTGGTTCTTACAGAGGCTAAAGCAGTTGGTTGGTGAAATGGAGGTGGTCATCATTTCTGGAAGGCATCATGCGATTATTCGTAGTGTTGCAGAGGTTTTTGGAGTTGAAAACCATGCATATTGTCTTCGTCATCTAAAGGAGGACTTTAGCCACCAGTTGATGATGGGAAGGGAAGGTAAAGATAACGCTCTAAAACTACTTGATGCTGTTGCATATGCAAGGTTAGAAATTGGTTACAACAGTGCAATGGAGAACTTAAGGAGATTTGATGCTAACTTAGCCAAATGGGTTGAAGATAACAATCCTGAACACTGGGCGATGTCAAAGTTCCCTAAAAAGCGTTGGGACAAAATGAATACTAATATCTTTGGGTCAATTAGTGCTTGGGTCAAAGAAGAACAACATCACACAATATTTAGTTTCATTGAGAAGCACATGGATATGCTAGCCTCTTTGTTAGTTGAATGTAAAACCACAATGCAGAGTTGGGAAAGATCCATTGGCCCAAAAACTGAGGATAAACTCTTGCATAACATTGCCAAAAGCAAAACAGTTTCAGATGGGAAGGCAAAGATAAGCAATTATGAAATTGATCTATTAGTTGTTCTTCAGTATGTTTGTCATGGAAGTTTGAACTGTTTTTTATTACTCTTTCCCCTAGTTTTGTTTGGGAAGAAATTTTAA 1905 38.64 MESNKSIYCYLYFGGEIIKADDGSINYKGGCTNGICINQGISHAEFVSKASKKVQIDPSSLSFKCTLKFDKSLLQPLDDDDDIYNMVLFNDGFSRVYVFEAHNGRVKQGVIDEQSTSVNVENNHFSSPSSSSQGVNDDNTIQRHEVVSRCIEFEAIPPVSSTLGKAISGSGQIFTNADEFRNALYLTSLAGRFNYKFKRNSLKQMTACCTAGGCPWKITARGVGATKIVRVHTFENKHNHSAQEESSSVPALRPNKAALVIDDMIRANPDYLPRQICEDFERQHGVKLTYNQAWKCKEKAKERIFGLPHNSYKLLPWLCKQLMETNSGTIAEWTSSDKGNFMQLFIAHGFSVHGFLMGCRPIISINSSNLSGPHKGALFSALAYDADDDMFPLAYAIVSSENYYNWFWFLQRLKQLVGEMEVVIISGRHHAIIRSVAEVFGVENHAYCLRHLKEDFSHQLMMGREGKDNALKLLDAVAYARLEIGYNSAMENLRRFDANLAKWVEDNNPEHWAMSKFPKKRWDKMNTNIFGSISAWVKEEQHHTIFSFIEKHMDMLASLLVECKTTMQSWERSIGPKTEDKLLHNIAKSKTVSDGKAKISNYEIDLLVVLQYVCHGSLNCFLLLFPLVLFGKKF* 635
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00912 634 PANTHER POLYPROTEIN, PUTATIVE-RELATED 166 590 - -
Vivi19g00912 634 Pfam MuDR family transposase 169 225 IPR004332 -
Vivi19g00912 634 Pfam MULE transposase domain 373 453 IPR018289 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00912 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr19:12834089 Vivi19g00912 Vivi-Chr19:16375070 dispersed
Vivi Vivi-Chr19:16375070 Vivi3g00191 Vivi-Chr3:1904172 dispersed