Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g00918 | ATGAGAAATGAGATGTGTGAAGGCCTCAAAAGCATTCCGAGGCCTATAAAAGTGAAACAAATGATTTTGTGCGGGAGTCCTCATCCTGTTTTCGATAGAAAAACATCCATCGTGAGTAAGCACATTAGTGAATTGGATGATTGCGAGAAGCTATTTATTCCAATGCATGACGAATGCCCTGGTCATTGGTATCTGTGCGTCATTGACTTCAAAAACTCTTATACCCAAATTTTGGACTCATTACGATCGAAGAATTGA | 258 | 39.53 | MRNEMCEGLKSIPRPIKVKQMILCGSPHPVFDRKTSIVSKHISELDDCEKLFIPMHDECPGHWYLCVIDFKNSYTQILDSLRSKN* | 86 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g00918 | 85 | Pfam | Ulp1 protease family, C-terminal catalytic domain | 44 | 83 | IPR003653 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
| Vivi19g00918 | 85 | Gene3D | Adenoviral Proteinase; Chain A | 16 | 85 | - | - | |
| Vivi19g00918 | 85 | SUPERFAMILY | Cysteine proteinases | 41 | 85 | IPR038765 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g00918 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr19:16533381 | Vivi3g00880 | Vivi-Chr3:11335675 | dispersed | |
| Vivi | Vivi-Chr19:16533381 | Vivi13g00958 | Vivi-Chr13:19294756 | transposed |