Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g00947 | ATGCCGAGGACAAGGGGATCAGAAATGCCTCAAAGGCAGTCTCCCCGAGGATCACTTCAGCTTCGAACATCAAGCTCTGATTCTGATCCTCTACATCATCGTCCTATTACCGATCGGAGCCCCAAGGTAGGAGACCGTCGATCCCCAAGAGGTGCTCAATCTGATTCCGTAAATCAGAAGAAACTCGGTACCCGCATTGCAGATTTAGAATCTCAACTTGGGCAAGCTCTAGAAGAGCTAAAGAACCTGAAATTTCAGTTAGCTTCTGCTGAAGCAGCAAAGAAAGAAGCTCAAGAAGAATTGGAGAAGAAAGCTAACATGCCAATCACTCATGATGCTATGGAAATCCAAGAGAAACATTCTCCAACAGAAGCTTACAAATCAAACAAAATAGACAGCAGTCATCCTGATGAAGCTCCAGATGACAACCAGCAGGAAACTGATGTCTTTGAAGTTCCAGTGGAAAAAGTGGCAGTTGAGGCCAAGCCACCAGCAATTCTGGAACCAGAGAAAGTGTCATTTGAAGAGTTGGCTATGAAGAATGATGAGATTAATTTACTGAAAGCAAAGTTAGAGGAAAAGGAAAAGGAATTAGAGGGGTCTTGTCAAGAAATTGAGGGCCTGAAAAAGCAGTTAAATGAAGCAGCGTCAGAGATTGTGTTGGTCCGAACAAAGGAGGAAGAGATGGCTCTGAGGCTGAGCCAACTGGGAGAAGACCTGAAAGCAAATAAAGCTAATGAAGCTCAATTGAAGGAGAAATTGGAAGCTGTGGAAGGAGTGAAGGAGGCATTGGAAGCAGAGATGAAAAAACTGAGAGTGCAAACTGAGCAATGGAGGAAAGCAGCAGATGCTGCAGCAGCTGTTTTGGCTGGGGGAGTGGAGATGAATGGCAGAAGGATTTCAGAGAGGTGTGGGTCAATGGATAAACACTTTGGCGGGGTATTTGAGTCATCTGCAGGTGGGTATGCTGGTTTTGTGGGCTCACCTGTTCTGGCTGATGATTTTGATGATGGTTTTGGAAGTGGAAAGAGGAAGGGTTCTGGCATTAAAATGTTTGGGGACTTGTGGAAAAGGAAGAGCCAGAAATAA | 1089 | 45.0 | MPRTRGSEMPQRQSPRGSLQLRTSSSDSDPLHHRPITDRSPKVGDRRSPRGAQSDSVNQKKLGTRIADLESQLGQALEELKNLKFQLASAEAAKKEAQEELEKKANMPITHDAMEIQEKHSPTEAYKSNKIDSSHPDEAPDDNQQETDVFEVPVEKVAVEAKPPAILEPEKVSFEELAMKNDEINLLKAKLEEKEKELEGSCQEIEGLKKQLNEAASEIVLVRTKEEEMALRLSQLGEDLKANKANEAQLKEKLEAVEGVKEALEAEMKKLRVQTEQWRKAADAAAAVLAGGVEMNGRRISERCGSMDKHFGGVFESSAGGYAGFVGSPVLADDFDDGFGSGKRKGSGIKMFGDLWKRKSQK* | 363 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g00947 | 362 | MobiDBLite | consensus disorder prediction | 27 | 49 | - | - | |
| Vivi19g00947 | 362 | MobiDBLite | consensus disorder prediction | 90 | 148 | - | - | |
| Vivi19g00947 | 362 | Coils | Coil | 174 | 225 | - | - | |
| Vivi19g00947 | 362 | MobiDBLite | consensus disorder prediction | 93 | 142 | - | - | |
| Vivi19g00947 | 362 | Coils | Coil | 233 | 281 | - | - | |
| Vivi19g00947 | 362 | MobiDBLite | consensus disorder prediction | 7 | 26 | - | - | |
| Vivi19g00947 | 362 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
| Vivi19g00947 | 362 | PANTHER | INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED | 144 | 362 | IPR029688 | - | |
| Vivi19g00947 | 362 | Coils | Coil | 59 | 107 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g00947 | K28097 | interactor of constitutive active ROPs |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr8:13470515 | Vivi19g00947 | Vivi-Chr19:17767658 | dispersed | |
| Vivi | Vivi-Chr19:17767658 | Vivi6g00323 | Vivi-Chr6:4251511 | transposed |