AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00948 ATGGGGAATAAGCTGGGGAGGAGGAGGCAAGTGGTGGAGGACAAGTACACGAGGCCACAAGGGCTGTATCAGCATAAAGATGTGGATCATAAGAAGCTCAGGAAGCTCATACTTGATTCCAAGCTTGCTCCTTGCTATCCCGGAGACGAAGAGGCCACCAATGATTTCGAAGAATGCCCAATTTGCTTTTTGTTTTATCCAAGTCTGAATCGCTCAAGATGTTGTACGAAAGGCATTTGTACAGAGTGTTTTCTGCAGATGAAGAACCCTAATTCAACTCGTCCAACGCAATGTCCTTACTGCAAAACAGCAAATTATGCTGTGGAGTATCGAGGTGTGAAGACAAAGGAAGAAAAGGGCATGGAGCAAATTGAAGAGCAACGGGTTATAGAAGCTAAAATAAGAATGAGGCAAAAAGAAATTCAGGATGAAGAAGAGAGAATGCAGAAAAGACAAGAGATAAGTTCTTCAAGCAGCATTTTGGCACAAGGAGAGGTGGAATACAGCACAACAGCGGTGCCATCTTTCAGATCTCCTGTGGAAGGTGATGAAATTGATTCTTCTCAAGACCCACGTGCTGCATCAATGATCATACAGACTTTACCTCCAAGACAGAACAGGGATGAGGAATTTGATCTGGATCTTGAGGATATTATGGTTATGGAAGCTATCTGGCTTTCCATTCAGGATAATGGCAGACACAGAAACCCACTTTATGGTGACACTACCACTGCTGAACAATATGTCACAGAAGAACACTACGTCTTGCCTGCTATGGCTCCACAGGTTGAATCATCATCATCCCCCTCTGGTGGGCTTGCATGTGCAATTGCTGCCCTTGCTGAGCGTCAGCAAATGGGTGGAGAATCCTCTACTAACTATAATGGAAATATGCCGGCATTCAACATGCCTCCAGGCAGTAGTAGGTTTTCCAACAGGGTGGAGCAATATCCAGAGAATTATCCTCCCATAGAGACAGGGACCAGCTATGCAAGCTCTGATGCAACAGATGAGGCTGGTGGGGTTGCTGCGCTGCCACCAACAGATGAAGCTGAAGGCAGCTTTCAAAATGTTGGGGGTCCCATTGTTCCTGAGAGTTTTGAGGAGCAGATGATGCTGGCCATGGCTGTTTCGCTAGCTGAGGCTCGAGCTAGAACAAGCACACAAGGAAAAAAGGAAAAAAAAAAGTTTACTCGAGAAGTACATTTTCTTTTTCCCTGCAAAAGCATAGAAAAAGTACGAGGGGAATGTTGTGTGAACTAG 1263 45.21 MGNKLGRRRQVVEDKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDEEATNDFEECPICFLFYPSLNRSRCCTKGICTECFLQMKNPNSTRPTQCPYCKTANYAVEYRGVKTKEEKGMEQIEEQRVIEAKIRMRQKEIQDEEERMQKRQEISSSSSILAQGEVEYSTTAVPSFRSPVEGDEIDSSQDPRAASMIIQTLPPRQNRDEEFDLDLEDIMVMEAIWLSIQDNGRHRNPLYGDTTTAEQYVTEEHYVLPAMAPQVESSSSPSGGLACAIAALAERQQMGGESSTNYNGNMPAFNMPPGSSRFSNRVEQYPENYPPIETGTSYASSDATDEAGGVAALPPTDEAEGSFQNVGGPIVPESFEEQMMLAMAVSLAEARARTSTQGKKEKKKFTREVHFLFPCKSIEKVRGECCVN* 421
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00948 420 SUPERFAMILY RING-U-box 55 108 - -
Vivi19g00948 420 PANTHER PROTEIN SIP5 1 389 IPR039301 GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00948 - -