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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00960 ATGGCTAGGATCTTTCACTGTTTTTTGTGGGTCTCCTCTAGGTACCTTCCATTTTTCTTCCCTCTTACTTGTAGTTCATCTCTATGGCCTGATTTCCAGAATCTGAATTCAATCTCCTGTCTTGTAGCTCTTTGTTATGCAAATATTGAAAGGCAGCAAGCAACCTCACCATCTGTTATCGTCAAAGGTGCCGGTATGGCAGGCAGTGCAGCTGCTCGTGCTCTTCATGATGCCTCATTTCGGATAATAAATTTTTTTATTTTCCAATGGGATGAAATTAGTAAATATAATTAA 294 39.46 MARIFHCFLWVSSRYLPFFFPLTCSSSLWPDFQNLNSISCLVALCYANIERQQATSPSVIVKGAGMAGSAAARALHDASFRIINFFIFQWDEISKYN* 98
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00960 97 Gene3D - 26 84 IPR036188 -
Vivi19g00960 97 SUPERFAMILY Nucleotide-binding domain 6 83 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00960 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr19:18546032 Vivi19g00962 Vivi-Chr19:18583209 proximal