AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00969 ATGGGAGGTGGCAGCTCCAGCAAGTACAGTTGCGGCAGTGCTTCTGAAACCCTAGAATGGATACACGCTATTCACCAATTTCTCACTCCATATTCTTTCCTAATCAATGCTCACGTAGTCAATTTCTTCAATGATCGACTATGGGAAGCTATCGATGAAGATTGGATTGATTGCCTCAAGAATGAGCCTGTGGACCATCTTCTCCAAATCCCATCTGGAATATTCCAGGATCACTGGCCTCCTTCGCTTCAGCAATTTGTCATTGCTTTAAGCTCCCTTGTGCTTCCTCGACATCAGGCAGGGTTGGAGTCGATATTGCCCAACATGGGCATGACTTCACTTGATAGTGTTCTTACTCAGGGCATGAATATGAAGAAAAAACATGAGGTAGAGGTTCTTTCTGCTGTTGTCGATTCAATTGCAAACAGTGTGGGAGCTGATACAATAGTAGATGTTGGTGCTGGTCAGGGCTATCTTGCACAAGTACTTTCCTTTCAATATCAGCTCTCTGTGGTTGCAATTGATTCTTGTTCTCATCATGGAAATGTTACAAATGCACGTGCAGAACGAATCAAGAAGCACTATGCAGCTCAGATGCGTAAATCTGGGTCAGGGAGTAGGAGTTTGAATGTGCCAAAGACTGTAACATGCCGTGTAATGTCTGCTGACATGTTGAAAGCCGTGAATGACATGTTACTGTCTGAAGATGATGTTCAGTGTCCACAGCAGATTGGACAAAGCATAAGCCAACCTTCTCATCCAGGACTAGATAAGAGAAGATTGCCATCTTTGTGTGATGTACATAATGAGTCTTCATTTGTTCTTGCTGGACTTCACGCATGTGGAGACCTTTCAGTAACAATGCTTAGGACATTTTTGGAGTGCAAAGAAGTTAAAGCAGTGGTTAGCATTGGTTGTTGTTACAACTTACTATCTGAAGAAGTATGTGAGAGTTCTTCTTCCCAATGTGGTTTTCCAATGAGTAATGTTATTAAATCTGCTGGCTTATCACTTGGAAAAAGTTCACGCGACCTTGCTTGTCAGAGTGCAGAGAGATGGAGAGTCATGGGAAAGGATGCTGGTCTTCAAAATTTTGAGTTGCATGCTTTCCGGGCTGCCTTCCAGATGGTTCTCTATAGGTATTATCCAGAAGTTTTGATTACAAGCCCTGCTATAGGGCGTCAAGGGAAAGCTTTGCGCCGCCAACAGCAAAGGAGGAATTTGGAGTCTTCTCTGCAACCTGAAAAAGATGACAAAGCAGCTTTTGCAATGGAGAAAGATTCCTTATTTCAAGGGATTTCTTCTGATGAGACTACCATATCTGACGCAATTAATTCTGTTGATAAGTATTCCCTCTTTGAGAAATTTTGCAAGTCTGGGTTGTGCCGCCTTGGTCTCAAACCTTTGCCAGATGTGAATTTTAAAGAGGTGTGGGAGGAAGCTGCACCATTTGCTGAATTTATTGGACCTTATTGGTCTCTTCGTGCTGCTTTAGGACCTCTTTTGGAAACACTTATTCTGCTTGATAGATTATTGTTCCTCCAAGAGCAAGGCAGTTCAGTGGAGGCAGTCATGTTGCCTATTTTTGATCCTGTATTATCCCCAAGGAATGTCGCCATAATTGCAAAGAAAAGAAATTGA 1641 42.72 MGGGSSSKYSCGSASETLEWIHAIHQFLTPYSFLINAHVVNFFNDRLWEAIDEDWIDCLKNEPVDHLLQIPSGIFQDHWPPSLQQFVIALSSLVLPRHQAGLESILPNMGMTSLDSVLTQGMNMKKKHEVEVLSAVVDSIANSVGADTIVDVGAGQGYLAQVLSFQYQLSVVAIDSCSHHGNVTNARAERIKKHYAAQMRKSGSGSRSLNVPKTVTCRVMSADMLKAVNDMLLSEDDVQCPQQIGQSISQPSHPGLDKRRLPSLCDVHNESSFVLAGLHACGDLSVTMLRTFLECKEVKAVVSIGCCYNLLSEEVCESSSSQCGFPMSNVIKSAGLSLGKSSRDLACQSAERWRVMGKDAGLQNFELHAFRAAFQMVLYRYYPEVLITSPAIGRQGKALRRQQQRRNLESSLQPEKDDKAAFAMEKDSLFQGISSDETTISDAINSVDKYSLFEKFCKSGLCRLGLKPLPDVNFKEVWEEAAPFAEFIGPYWSLRAALGPLLETLILLDRLLFLQEQGSSVEAVMLPIFDPVLSPRNVAIIAKKRN* 547
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00969 546 PANTHER CGI-41 METHYLTRANSFERASE 14 545 IPR052220 -
Vivi19g00969 546 Pfam Methyltransferase domain 125 313 IPR025714 -
Vivi19g00969 546 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 185 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00969 - -