AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00974 ATGACTGAAAGTTTGCCTGGTTGTGATGGAATTTACTTTAAAGGTATCATTTGTTCCTTTAATGGTTTGATCTGCTGCGTTAATTACTGCAACGCCTTTCTGCACGACATACGTATCTGCAACCCCGCTACTGGAGAAGTCCTATTACTCCCACAAAGCCGGGAATTAGAACATCCAGGCGAGGTTGGTGTTGCTTTTGGCCCTGGAATCAATGAATATAAAGTATTTCAGTTTTATGGGGGAACGCAACATTATGGATGTGAGGTATATTCTTCAATCACTGGATCTTGGAAATCCATAGGCAGGGTTGCACACACTCCTTATTCTTCTTTTTCTTCCAATCATGTATGCATTAATGGAATAGTGTACTGGTTCACCCGATCAGAAGAAGGCAGCGGCTCCATCCTTGTAGTTAATAGAGAGGAAATTTTTAGCACAATTCGGCTTCCAAAGGAGAAAATTCTACGTCCTTACTTGATCAATCTCGAAGGTTGTTTGTGTCTAGTGGTTGACAATGGACTTGAGGAATATAGATTTGATATATGGGCTTTGCAAGATAGCAAGGAGTCCCTTTGGACCAAGAAATGGAGTGATTATATGCCCTTTTGTAGCATTGCAGATATCATTAACCATGTAGTCGTGCGAAAAAATGAAATTCTTTTAGGAACTATAACTCATTTTTTTCTTTATAATATGGGGACCAGGACTTGGAGAAAATTCAACTGGGAACATGATGGTGAAGAAATAGTGATTTGTCTTTCGGTGCCATACACAGAGAGCCTCCTCCCTTGTAAGTAA 798 40.1 MTESLPGCDGIYFKGIICSFNGLICCVNYCNAFLHDIRICNPATGEVLLLPQSRELEHPGEVGVAFGPGINEYKVFQFYGGTQHYGCEVYSSITGSWKSIGRVAHTPYSSFSSNHVCINGIVYWFTRSEEGSGSILVVNREEIFSTIRLPKEKILRPYLINLEGCLCLVVDNGLEEYRFDIWALQDSKESLWTKKWSDYMPFCSIADIINHVVVRKNEILLGTITHFFLYNMGTRTWRKFNWEHDGEEIVICLSVPYTESLLPCK* 266
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00974 265 SUPERFAMILY Galactose oxidase, central domain 24 244 IPR011043 -
Vivi19g00974 265 Pfam F-box associated domain 116 197 IPR013187 -
Vivi19g00974 265 NCBIfam F-box protein interaction domain 19 197 IPR017451 -
Vivi19g00974 265 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 16 241 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00974 - -