AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00977 ATGGGTAGTCACAGTGATGACAGACCCATAAAATTGAGGACCAGTTTGGAGCAGTTGTACTCTGTCTGGAGGCAGAGGATTGAGGAGAGGAGGCCTTTTCAGTATGTAGTTGGGTGTGAGCATTGGAGGGATTTAGTGTTGAGTGTTCAAGATGGGGTTTTGATTCCCAGGCCTGAAACGGAGGTTTTTGTGGATTTGGTGGGGGATGTGGTGACTCAGAATGGAGATTTGACGCAGGGTTTGTGGGCTGATTTGGGGACTGGAAGTGGGGCTATTGCCATCGGAATTGGGAGGATTTTGGGACCTCGTGGGAGGGTCATTGCCACGGATTTGAGCCCTGTTGCCGTTTCTGTTGCTTCCTTTAATGTGCAGAGGTACAGCTTGCAGGATATAATTGAGATACGGCAAGGATCTTGGTTTGAACCTCTGAAGGATGTTGAAGGAAAACTTTCAGGTCTTGTGAGCAATCCACCATATATTCCAAGTGATCATATTTCTGGTCTACAACCTGAAGTTGGGTGGCATGAACCAAGACTTGCATTAGATGGTGGTGTGGATGGCATAGATGCTCTTCTCCATCTCTGCAATGGGGCTGCTTCAATGTTGAAACCTGGTGGATTTTTTATTTTTGAGACAAATGGGGAGAAACAATGCAAGTTTCTTGTAGACTACATGGAAAATGAATCCAAAGGCAACTTCTATGATGTTAAAATAGTACCAGATTTTGCTGGTATCCAAAGATTCGTGACTGGCTTCCATCACTAA 765 45.23 MGSHSDDRPIKLRTSLEQLYSVWRQRIEERRPFQYVVGCEHWRDLVLSVQDGVLIPRPETEVFVDLVGDVVTQNGDLTQGLWADLGTGSGAIAIGIGRILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPLKDVEGKLSGLVSNPPYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLKPGGFFIFETNGEKQCKFLVDYMENESKGNFYDVKIVPDFAGIQRFVTGFHH* 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00977 254 PANTHER - 4 253 IPR052663 -
Vivi19g00977 254 Pfam Methyltransferase small domain 78 159 IPR007848 GO:0008168(InterPro)
Vivi19g00977 254 CDD AdoMet-MTases 84 211 - -
Vivi19g00977 254 Gene3D Vaccinia Virus protein VP39 47 253 IPR029063 -
Vivi19g00977 254 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 238 IPR029063 -
Vivi19g00977 254 NCBIfam HemK family protein methyltransferase 16 253 IPR004556 GO:0006479(InterPro)|GO:0008276(InterPro)
Vivi19g00977 254 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 153 159 IPR002052 GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00977 K02493 release factor glutamine methyltransferase [EC:2.1.1.297]