AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00996 ATGGAATCAATTAAATATTTCCAACGGATCGCTTCTCTTCTAAGTAGGATATTGTGGCGGTGGCTGCCCTCTCGGTATCGTGTATGGAATGATGCTAAGTTGTTGAGGGTTCTGGAGGTCATACGTGCAAATTCTGATTCTTCTGTTAAAGTTGCAGTTTTACAATTGTACTCTGCTTTAGCTTTATGTGGTAATGGGGCTGAGAGGCTCCTAGAAAATGGAGAGAACTTCATAAAAATGGTGGTGCATTGGATGGACAGCACACAACCTCCTTTTGTTCGAATAGAGGCATTTAAACTCGCTCAGTTGTTAAAGATGAGTGAACAAAGATGTTCGAAAATGCTGAGATTTTGTTGTGAGCCCATTGTCCAAGCCATAATTGGTGCACTGCGTGAATTCAACTTGTTGTTTGAAGATATTACTCAAGACACAATTTCTATGGCAGTGGAGGCAGGTTGTTTGGCTTTGATTACTCATTGGGCAGGGAAGCATCACATTTATTTTTGGAAGCTAGAAATCGGTGAAGTCTTATTTGACTTTTGTTCAATAGAATTTTTGTAA 561 39.75 MESIKYFQRIASLLSRILWRWLPSRYRVWNDAKLLRVLEVIRANSDSSVKVAVLQLYSALALCGNGAERLLENGENFIKMVVHWMDSTQPPFVRIEAFKLAQLLKMSEQRCSKMLRFCCEPIVQAIIGALREFNLLFEDITQDTISMAVEAGCLALITHWAGKHHIYFWKLEIGEVLFDFCSIEFL* 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00996 186 PANTHER OS06G0674800 PROTEIN 2 180 IPR044953 -
Vivi19g00996 186 SUPERFAMILY ARM repeat 9 136 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00996 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr19:19553944 Vivi19g00996 Vivi-Chr19:19618651 dispersed
Vivi Vivi-Chr19:19592331 Vivi19g00996 Vivi-Chr19:19618651 tandem