AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00999 ATGGCAGGTAATAGCCTGCCATCTCTGGGTCGTGTGAAACTCTGCGATCTGATTGCTTGTGAAGGCCTTCCTTCTGATTCTTATAAGTTATCTGTGTCCACTTTGTCACAATCACTAGCTCAGTATTCTGCTGCTATCATTCAATTTCCTTCAAGTGATGGAGCCCTTCTAAGGTCTGGTTTGGATTCTGCTCACCTCTACTTCCATCAAAGAGCATCTTACCCAGCTGCAGATATGATCCATAACAATGAATCTCGTGAGTGGTGCAAGACCTCTGGTTATTATGCAGATCCGCAACAGTGGCAAGAAACCTATGATTTCAGACCAGGCTTAACTCCTCCAGAATCAAATAGTGGTTTGGAATTCCCTCCAGCTGGTTTGCCAGATATATTTTCTCTGCTTGGCAAAGCAGCTCGGGATATTCTGGATGCTATCAGCTTCTATTTGAACTTGCGTAGCTCGCCTTTTACTGAAATACTCGATAATGTTCCCTTGAGAAGTCGTGAAATATCATCTTCTGTACTGTCTGTTTGCTGTTATGGAAGGCCATCCTTTCAGGGACCACAACATCATAATTTAACTACCCAAGAGGATGGCCAATTAGTTATGTTTTCTGATCATGAGCACCAAGTTGATAAAAGCCTGATAACACTTGTCAAGTCAGATAAAGCAGGCTTACATGTAAGAGACTTTCATGGTCGTTGGGTTCTTGTGGATGGGGATCTTGGTCCCCAAGAAGCCATTGTTTATCCTGGACTTGCACTCTACCAGGCAACTGCTGGCTATGTTGGCCCTGCACTACACCGAACAGAGATTAGTAATATGCAGGGTAATATGTATGGACGATGCTCTCTAGCTTTCAAACTCATGCCCAAATCCATGACCAGTCTCAATTGTTCGGAGATGAGGGCAGCTGGTCATGGGGTTGAAGCTCAGTTTCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCCCACCCCACTGAGCAACTTTTTAACAGAAACAATTTCCCAAGTTTCAATTTTCCTACAGCCCAAGATGGATCTATGAAGCCCTTGATGAGGAGGAGGAAGAATAATTCTAGATGCAAACCTCTCCCACCTTCCAAGAGGTTACGACTAGAGGCACAAAGAGTTCTCAAGGAGAGAGTTCAAGATATTGCAGATAAGAAGGGCATCAAGTTGAGGTTCTGTAATCTGAAGGAATGTGAGAGTCACATCCATACACTTGACAGTCCTTGTGCCAATACAAGAATGGAGATCGGGTGGCCACCAGGGGTTCCATTTGTTCATCCTCATGATCTACCAAACAAGGCAAAGATTGGTTTTCTTGAAGCATATGAACCTGGTTGGACAGCCACTCATGATATGGAGTTAAGTCTAATAGAACCTGGACAGGCCAGTCAACACTCGGCTAACTGTAACTGTAACTCTCCTGTTCAAGTTCTATATACACATGAGAACACATTCTTTTGGACCAAACTTTTGTTCTGTGATTAA 1503 43.71 MAGNSLPSLGRVKLCDLIACEGLPSDSYKLSVSTLSQSLAQYSAAIIQFPSSDGALLRSGLDSAHLYFHQRASYPAADMIHNNESREWCKTSGYYADPQQWQETYDFRPGLTPPESNSGLEFPPAGLPDIFSLLGKAARDILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCYGRPSFQGPQHHNLTTQEDGQLVMFSDHEHQVDKSLITLVKSDKAGLHVRDFHGRWVLVDGDLGPQEAIVYPGLALYQATAGYVGPALHRTEISNMQGNMYGRCSLAFKLMPKSMTSLNCSEMRAAGHGVEAQFQLPVPVDDFMQRSHPTEQLFNRNNFPSFNFPTAQDGSMKPLMRRRKNNSRCKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCNLKECESHIHTLDSPCANTRMEIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTATHDMELSLIEPGQASQHSANCNCNSPVQVLYTHENTFFWTKLLFCD* 501
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00999 500 Gene3D - 17 329 IPR027443 -
Vivi19g00999 500 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 478 - -
Vivi19g00999 500 SUPERFAMILY Clavaminate synthase-like 87 301 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00999 - -