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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01002 ATGAGAGATACGATGTTTATGGGTTCCTACAGAAGCCCTGAAACCCATTTGCTTACTCCACCAGCTAATCAGACAGTTTTCGATGTTGAAAATAATATGAATGATATTTCAGAGCAATCCAAACCTGGTGGAGTGGAAGAACATGAGAATAGTGGGTTGACACGTGGTTATAGAAGCAGTGATATTGGACGAGATAATGATGTTGCAACAATGACTACGAGCCAGACTCCAGAAGATAATGTATACCAGAATAGGGTTTCTGATTCCTCAATGCCCCTGGTGCACCCGTTGCATTCTTTTCCCACATATAATGCTTATTTCTAA 324 40.74 MRDTMFMGSYRSPETHLLTPPANQTVFDVENNMNDISEQSKPGGVEEHENSGLTRGYRSSDIGRDNDVATMTTSQTPEDNVYQNRVSDSSMPLVHPLHSFPTYNAYF* 108
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01002 107 MobiDBLite consensus disorder prediction 65 90 - -
Vivi19g01002 107 MobiDBLite consensus disorder prediction 35 94 - -
Vivi19g01002 107 MobiDBLite consensus disorder prediction 1 21 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01002 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr19:19775640 Vivi3g01006 Vivi-Chr3:16433627 dispersed