Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01005 | ATGCTTAGACATGGTTACTTCCATGATAAAATTCTATTGCACTCGCCATTTATGAGTATAACTTTTTCTGTACTAATTTCTTCGTGCAGGTTGGTTCAAACAATGGATTACTCTGTAATACTATTTGATACAGCTCCTACTGGTCATACACTTTGGTTATTGCAATTTCCATCATTAGAGAAGGGGCTTGCTAAAATGATGTCCTTAAAAAATAAATTTGGTGGTTTATTAAATCAGATGACCTGTCTCTTATTTGGTGTGGACGAGGTATTTGGTGAGGATGCACTTCTGGGAAGGCTCGAGGGCATGAAAGATGTGATTGAACAAGTGACTAAGCGATTCAAGGACCCAGTAAGATCTCTCATCCTAAAATATTTTCTATGGCTGGACACTAAATCACTTCTGTAG | 408 | 37.5 | MLRHGYFHDKILLHSPFMSITFSVLISSCRLVQTMDYSVILFDTAPTGHTLWLLQFPSLEKGLAKMMSLKNKFGGLLNQMTCLLFGVDEVFGEDALLGRLEGMKDVIEQVTKRFKDPVRSLILKYFLWLDTKSLL* | 136 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01005 | 135 | Pfam | Anion-transporting ATPase | 29 | 120 | IPR025723 | - | |
| Vivi19g01005 | 135 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | - | - | |
| Vivi19g01005 | 135 | Gene3D | - | 8 | 123 | IPR027417 | - | |
| Vivi19g01005 | 135 | PANTHER | ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE | 29 | 118 | IPR016300 | GO:0005524(InterPro)|GO:0006620(PANTHER)|GO:0016887(PANTHER)|GO:0016887(InterPro)|GO:0043529(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01005 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr15:15225095 | Vivi19g01005 | Vivi-Chr19:19846206 | dispersed | |
| Vivi | Vivi-Chr19:19846206 | Vivi6g00234 | Vivi-Chr6:2996460 | dispersed | |
| Vivi | Vivi-Chr19:19846206 | Vivi13g00537 | Vivi-Chr13:6016724 | transposed |