AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01010 ATGGAGAGAAGGGAGAATCAATCTCCGCAAAATGAGACTGCTCGCATTCTTGTGGAATTTTTAGAGGTCGCCATTACTTCAATCGTTTTTCTCAAAGGAATTTATCCTTCTGGCGCATTTGAGAGAAGGAGATATATGAATGCGGTGGTTCAGAGGGCTCGCCATCCTCAGCTCAGAGACTACATCCACTCTGCTGTCTCTGGACTTCTTCCTTTTATCCAAAAGGGATTGGTGGAGAGAGTAGCAGTTATTTTCTTCAATGTTGACAACATTCCCATAGAGAGATTCATATTCAAGCTTGCAGTGAACCAATCGTATGACTCAAAAGTAGAAGAAGCTGCCCTGGAGTTCTCTCTCAGGTCGTTCTTGATCAAGCTTCCTGTATCAGAAACCCTCACTAAGGCTCTCCCCAGGGATTGCAGATGGGAGATAACAGCATACTTCCATTCTCTTCCTGATGCAAGTAGGAGCAAAGATGCAGAGGTATGGATCCCAACAGACACTAAGCAGTGGCAGACGCCTCCATTTCATCAATCTCATTTACTACATTAA 552 44.2 MERRENQSPQNETARILVEFLEVAITSIVFLKGIYPSGAFERRRYMNAVVQRARHPQLRDYIHSAVSGLLPFIQKGLVERVAVIFFNVDNIPIERFIFKLAVNQSYDSKVEEAALEFSLRSFLIKLPVSETLTKALPRDCRWEITAYFHSLPDASRSKDAEVWIPTDTKQWQTPPFHQSHLLH* 184
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01010 183 ProSiteProfiles HORMA domain profile. 11 183 IPR003511 -
Vivi19g01010 183 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 8 174 IPR045091 GO:0016035(PANTHER)
Vivi19g01010 183 Pfam HORMA domain 18 109 IPR003511 -
Vivi19g01010 183 Gene3D HORMA domain 6 181 IPR036570 -
Vivi19g01010 183 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 180 IPR036570 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01010 K13728 mitotic spindle assembly checkpoint protein MAD2B