Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01015 | ATGGCTCTCAGCTATAAATATTGGGATGATTGTGTGGATCCACGAGATCTGGAGGCACTGTGGTTGGATCCCGATGTGAGCACTGAATGGCTTGACGTTGGAGAGACTAGAGGTAGGAAAGTTCACCTCTCAAGGGATCCTGATGGAGAGCCTTATCTCACTCAAATTGAGATGAAGGCAGTTGCTGCGATTGTTGTCAGCAGGCATTTTGATTCACAGATAGATCTGGAGATGATATGTGCTATCTCTGAAATTGAAAGTGATAGACAGCCACTTGCTGAACAGTATGACAAAAAGGCTAAAGACACTACTCTGGGGATCATGCAACTTCTACCAAAAACTGCTGATTGGCTGGTTAGGGAGTTGGGCTACCGGACATATGAAGTGGAAGGGAATCCAATCCTTCTGTTCAGGCCTTTTATAAATGTATACCTAGGTGCTGCCTACCTTAAGTGGTTATCAAACTATGATGGAAAAGAAAGAAGTGAAGAGTTTGTAGTTCGGGCATACAAAGGTGGCCCAAAGAAGGCAGCTCATAAGTCAACTTTGGAATATTGGAAGCGCTATCTTTCAGTTAAAGAAAGTCTTCCATTTAGAAAATCTTTGTACGATGGCCCATATCCAAATGATGCTTCTGGTTCTGGTGCACCTGTTTCAGTAATTAAAGGTGTTAATCATACATTTTGGGACTCTAGAGCTTCTCCTGAAGACATGGACGAGATGTGGAATCACCCTGATGTCCTGAAAGAGTGGAGCAAGTGCGGAGAGATACGGGGAAAGGTGCTATTTTCACATGATAAAGAGAAGAGACCTTATCTTTCTCGTGTGGAAGTGAAGGCAGTTGCAGAAATCATTCTTTCAAAACACTTCAGCACAAGACAAGTTAAATCTACAATTCTATGTGCTCTTGCAGAGATTGTTAGCATGCGCTTTGTGAATGGCGTCGGTGCACGAACTGGAATAATGGGAATAGATTACCCAACAGCTATGTGGCTTTACAGAGATTTGGGCTACAAGGCTTACAGAGTTGAAGCTGTGGATGATCTAACCAAGCCATTCATCTCCATGTACTTTGGTGCAGCTTATTTAGCTTGGTTATCTGAATATGAAGGGCGGCAAAGAACTCCTCAATTTATTGTTCAGGCTTATCTAGCTGGACCAAAGAATGTGAATCTTCAGGAAACGGGTCATCATTGGCTTAACTTTGAGAAAGCAGTAACCTATTATGAACCAAAAAAGAAGGAAGATGGAGGTTGCTCGATATTATAA | 1269 | 42.4 | MALSYKYWDDCVDPRDLEALWLDPDVSTEWLDVGETRGRKVHLSRDPDGEPYLTQIEMKAVAAIVVSRHFDSQIDLEMICAISEIESDRQPLAEQYDKKAKDTTLGIMQLLPKTADWLVRELGYRTYEVEGNPILLFRPFINVYLGAAYLKWLSNYDGKERSEEFVVRAYKGGPKKAAHKSTLEYWKRYLSVKESLPFRKSLYDGPYPNDASGSGAPVSVIKGVNHTFWDSRASPEDMDEMWNHPDVLKEWSKCGEIRGKVLFSHDKEKRPYLSRVEVKAVAEIILSKHFSTRQVKSTILCALAEIVSMRFVNGVGARTGIMGIDYPTAMWLYRDLGYKAYRVEAVDDLTKPFISMYFGAAYLAWLSEYEGRQRTPQFIVQAYLAGPKNVNLQETGHHWLNFEKAVTYYEPKKKEDGGCSIL* | 423 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01015 | 422 | Gene3D | - | 50 | 205 | - | - | |
| Vivi19g01015 | 422 | Gene3D | - | 292 | 415 | - | - | |
| Vivi19g01015 | 422 | PANTHER | TRANSGLYCOSYLASE | 1 | 422 | - | - | |
| Vivi19g01015 | 422 | SUPERFAMILY | Lysozyme-like | 73 | 196 | IPR023346 | - | |
| Vivi19g01015 | 422 | CDD | LT-like | 312 | 391 | - | - | |
| Vivi19g01015 | 422 | Pfam | Transglycosylase SLT domain | 312 | 399 | IPR008258 | - | |
| Vivi19g01015 | 422 | Pfam | Transglycosylase SLT domain | 72 | 186 | IPR008258 | - | |
| Vivi19g01015 | 422 | SUPERFAMILY | Lysozyme-like | 312 | 392 | IPR023346 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01015 | - | - |