AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01016 ATGTACTCTGTTTACCAATTTCACCAGGTCAATTATGGTGGCCCTCTGAGATGTTCTGACAACATTTTCCGAGAACCCTTGCATTTTCATGCTTCAGTTTTACAGATCATGATGGTAGATCGCTATTGGATTGCCTTCTTTGCTGTCTTTGTGTATCTTGTTAGAGTTTTTGAAGCTAGTGTCGGTGATGCAGATCCACTTTACAGGGATTGTGTAGAACAATGTGAAAAGACTGGATGTGTCGGGGAAAGATGCTTTCCACACTGCAAATTCCCTTCAGATGGTGCAGTTGTTGATGGTCCATGGTATCTGCAAGAACCTCTTTATTTGCGGTGGAAACAATGGGATTGTCAGAGTGATTGTCGTTACTATTGCATGCTTGACAGAGAGAAAGAAAGAGAAGCACTTGGCAATGGGCCTGTCAAGTATCACGGTAAATGGCCCTTCAAACGCGTGTATGGGATTCAGGAGCCTGCTTCTGTAGCCCTCTCTGCTCTCAACCTTGCAATGCAGTTCCATGGTTGGCTGTCCTTCTTCATTCTTCTGAACTACAAGTTGCCACTGAAGCCAAATAAGAAGGCATACTATGAATATACCTGTTTGTGGCATATATATGGACTCTTATCAATGAACTCCTGGTTCTGGAGTGCTGTATTCCATAGTCGAGATGTGGATTTGACTGAGAAGCTGGACTACTCATCTGCAGTGGCATTACTTGGGTTCTCACTCATTCTTGCCATACTAAGAAGCTTCAATGTCAGGGTTGAGGCTGCCAGAGTCATGGTTTCTGCTCCGCTGCTAGCTTTTGTGACCACCCATATATTGTACCTCAACTTCTATAAATTTGACTATGGGTGGAACATGAAAGTGTGTGTTGTCATGGGTGTTGCTCAACTTCTCATTTGGGCGATATGGGCTGGTGTCACTCGTCATCCTTCTCGCTGGAAGTTGTGGACAGTGGTTGTGGGAGGTGGTCTTGCAATGCTCCTGGAGATCTATGATTTCCCTCCATATGAAGGATTTGTTGATGCTCATGCTCTTTGGCACGCTACCACTATCCCCCTCACCTATATCTGGTGGAGTTTCATCAAGGATGATGCTGAGTTCCAGACTGCTAACCTCCTGAAAAAGGTAAAGTAG 1140 44.74 MYSVYQFHQVNYGGPLRCSDNIFREPLHFHASVLQIMMVDRYWIAFFAVFVYLVRVFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSFFILLNYKLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK* 380
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01016 379 Pfam Per1-like family 107 367 IPR007217 GO:0006506(InterPro)
Vivi19g01016 379 PANTHER PER1-RELATED 38 377 IPR007217 GO:0006506(PANTHER)|GO:0006506(InterPro)|GO:0016788(PANTHER)|GO:0031227(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01016 K23553 post-GPI attachment to proteins factor 3
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr16:15754260 Vivi19g01016 Vivi-Chr19:20132823 dispersed