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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01023 ATGTACACTGTGGACCCTAAGCTACAGGCCCTATCATTTGAGTATATGGAGGATCTAGCGGTCAAAGATATATTTCTTGATTTTGGGTTGCATATTTTGCTGAAGAATGGATGTACGATAGTGCAAAGCATGTTGATACAGAGTGGTGCCTATCAGTTGGTCTTCATTGATTTTGGATTAAGCTTCATGTCAATCTTTCCAGTAGATAAAGCTGATGCCTTATATGTGCATGAGTGGCCCTTGCTCTTGGTGCATTCTTCCTATGAGAATGTTTGA 276 40.22 MYTVDPKLQALSFEYMEDLAVKDIFLDFGLHILLKNGCTIVQSMLIQSGAYQLVFIDFGLSFMSIFPVDKADALYVHEWPLLLVHSSYENV* 92
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01023 91 PANTHER NON-SPECIFIC SERINE-THREONINE PROTEIN KINASE 37 91 IPR022495 GO:0000408(PANTHER)|GO:0004674(InterPro)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0006468(PANTHER)|GO:0070525(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01023 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr19:20274021 Vivi9g00713 Vivi-Chr9:10981984 dispersed