AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01040 ATGAATACCGACAAGGAAGCCTTTCTCAGGGAGTTCGGGAACGATTACGGATACCCCAGTGCTCCCTTCAACATCGACCAAATCAGAGCCTCTCAATTCAAGCGGTTGGACGGTCTTGTATACTTGGACCATGCTGGATCAACATTGTACTCTGAGTCACAGATGGAAGCAGTCCTTAATGATCTAACTACTAGTGTTTATGGAAATCCTCATAGCCAAAGCGACACCAGTTTGGCCACTTGTGACATTGTAAGAGAAGCCCGCCAACAGGTCCTTGATCACTGTAATGCATCCCCAAAAGATTACAAATGCATATTCACTTCAGGGGCAACAGCAGCATTGAAGCTGGTAGGAGAGGCCTTTCCATGGAGCAGTGAGAGCAATTTTATGTACACGATGGAGAATCATAACAGCGTCCTTGGGATCAGAGAATATGCTCTCGATCGAGGAGCTTCAGCTTTTGCAATAGATATTGAAGAGGCTGGGCATCATGGTGGAGTCTCCAGAAACACTTCATCTTCTATTAAAGTGTCACCACGCCCTATACAAAGGAGAAACCAAGCAAGATTCCCAGGAGAAGCGCCTACAGGTTACGCCCATAACTTATTTGCATTTCCCTCAGAGTGCAATTTCTCTGGTGTAAGATTCAGTCTCGACTTGGTGAAGATTATCAAGGAAGATGCTGAGAGAATTTTGACCGGCCCTCCATTCTACAAGGGTTGCTGGATGGTCTTGATTGATGCTGCAAAAGGATGTGCAACAAAACCACCTGATTTGTCAAAGTATCCTGCAGATTTTGTTGTCATCTCATTCTATAAGCTATTTGGTTATCCGACAGGACTTGGCGCCCTCATTGTTCGAAGTGAAGCTGCCAAGTTGTTGAAGAAGACCTATTTTAGCGGAGGTACGGTGGCAGCCTCCATTGCTGATATTGACTTTGTTAAAAGAAGAAATGACATTGAGGAGCTGTTTGAGGATGGCACCGCATCATTCCTAAGTATAGCATCTATTCGACATGGGTTCAAATTACTCAACACTATAACTATATCTGCAATATCACGGCACACATCATTACTTTCCACATATGTGAGGAAACAGCTCTTGGCCTTAAGGCATGACAATGGATCTGGTGTCTGCATGCTTTATGGGGGATTCAGTTCAGAGAAGTTGTGCAATGAAATGGGGCCTATAGTAACTTTCAACTTGAAACGACCAGATGGTTCTTGGTTTGGATACCGTGAAGTGGAAAAATTGGCTTCTCTATCCAGAATTCAGCTACGGACAGGATGCTTTTGCAATCCTGGTGCTTGTGCAAAATATCTGGGCTTGTCTCACTCTGATCTGCTTTCCAATATTGAGGCTGGCCATGTTTGCTGGGACGATAACGACATAATACATGGGAAACCAACTGGAGCTGTAAGAGTATCCTTTGGTTATATGTCAACATTTGAAGATGCCAAGAAATTCATTGATTTCATAGTGAGTTCCTTTGTATCAGTGCCATATCAATCTGGGCAAGTACATCTACCAAGGTCCATACCCTATTCAAGTGAAGGCCGCGAAAGAAGACTCTCAACTACATCTTTTCGTCTTAAGTCTATTACTATCTACCCGATAAAATCATGTGCAGGATTCAGTGTAGAGGGTTGGCCTCTAAGCAATACTGGCCTTTTACATGATCGAGAATGGATTCTAAAAAGCCTGACTGGAGAAATTCTTACACAGAAAAAGGTTCCAGAAATGCACCTTATTACTACTTTTATTGACCTCAGTCAGGGAATTCTGTTTGTAGAATCACCACGATGCAAAAGAAAACTGCGTATCAACCTTAAATCAGATTCGTATTGTGGTGGGAAAGAGGCAATGGATTTGCAGGCCCAAAGATATGAAGTCCAGGGTTATCATAATGAAGTCAACATTTGGTTTAGCAATGCCCTCGCTCGACCTTGCACTTTGTTACGATGTTCTAGTTCCCAGTATTACTCGTGCTTGGGCAAGAGAGGAAGTGTAGGCATGTGCAGAGATGTGGAGACCAGATTGAATTTTGTGAATGAAGCTCAATTCTTATTAATATCCGAAGAGAGTGTATCCGACCTCAACAGCAGATTAAGATCAAATGTACAAAAAAGTTCTACAGGACCACAAATTCAACTCAATCCATTGAGATTCCGACCCAATCTTGTCATATCTGGAGGAGAACCATATCATGAAGATGGATGGCTGAGCCTTAAAATTGGAAATAAGTGCTTTACATCATTGGGTGGATGCAACCGTTGTCAAATGATCAATTTGGATAATCAAGCAGGACAAGTGCAGAAGTCAACCGAACCTTTGGCTACCTTAGCATCATATAGGAGAATAAAGGGGAAGATTCTTTTCGGGATACTCCTGCGGTATGAGAATGACAATGAAGTCGGGCAGGAGGCAGATTCCTGGCTTCAAGTGGGACAAGAAGTAGATCCAAATTTTGATTAG 2475 42.87 MNTDKEAFLREFGNDYGYPSAPFNIDQIRASQFKRLDGLVYLDHAGSTLYSESQMEAVLNDLTTSVYGNPHSQSDTSLATCDIVREARQQVLDHCNASPKDYKCIFTSGATAALKLVGEAFPWSSESNFMYTMENHNSVLGIREYALDRGASAFAIDIEEAGHHGGVSRNTSSSIKVSPRPIQRRNQARFPGEAPTGYAHNLFAFPSECNFSGVRFSLDLVKIIKEDAERILTGPPFYKGCWMVLIDAAKGCATKPPDLSKYPADFVVISFYKLFGYPTGLGALIVRSEAAKLLKKTYFSGGTVAASIADIDFVKRRNDIEELFEDGTASFLSIASIRHGFKLLNTITISAISRHTSLLSTYVRKQLLALRHDNGSGVCMLYGGFSSEKLCNEMGPIVTFNLKRPDGSWFGYREVEKLASLSRIQLRTGCFCNPGACAKYLGLSHSDLLSNIEAGHVCWDDNDIIHGKPTGAVRVSFGYMSTFEDAKKFIDFIVSSFVSVPYQSGQVHLPRSIPYSSEGRERRLSTTSFRLKSITIYPIKSCAGFSVEGWPLSNTGLLHDREWILKSLTGEILTQKKVPEMHLITTFIDLSQGILFVESPRCKRKLRINLKSDSYCGGKEAMDLQAQRYEVQGYHNEVNIWFSNALARPCTLLRCSSSQYYSCLGKRGSVGMCRDVETRLNFVNEAQFLLISEESVSDLNSRLRSNVQKSSTGPQIQLNPLRFRPNLVISGGEPYHEDGWLSLKIGNKCFTSLGGCNRCQMINLDNQAGQVQKSTEPLATLASYRRIKGKILFGILLRYENDNEVGQEADSWLQVGQEVDPNFD* 825
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01040 824 Gene3D - 54 340 IPR015421 -
Vivi19g01040 824 Pfam MOSC domain 678 819 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Vivi19g01040 824 SUPERFAMILY MOSC N-terminal domain-like 531 663 - -
Vivi19g01040 824 Pfam Aminotransferase class-V 40 163 IPR000192 -
Vivi19g01040 824 Pfam Aminotransferase class-V 243 489 IPR000192 -
Vivi19g01040 824 ProSiteProfiles MOSC domain profile. 653 822 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Vivi19g01040 824 Pfam MOSC N-terminal beta barrel domain 529 648 IPR005303 -
Vivi19g01040 824 SUPERFAMILY PLP-dependent transferases 24 494 IPR015424 -
Vivi19g01040 824 Hamap Molybdenum cofactor sulfurase [MOCOS]. 15 821 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Vivi19g01040 824 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 5 498 - -
Vivi19g01040 824 Gene3D Aspartate Aminotransferase, domain 1 341 498 IPR015422 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01040 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]