Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01054 | ATGCTAAATTTAGCTGAACAATGGGGATGGACTGGCAATGACACTGAAACTCATCTGGGAAAACTTCTGAAGCAAATGATCGATGAGAGTGACCCTAAATTACCATTTGGATACATCAAATTGGATGAGGTAGCAAGCCGTGCAAAAATAAACTCTCCTCCCCTCATGACCATGATGAGCGCCCTGAACAAGGAGGGATATGCTGTTAGCAGGTCACACATTGCCTCCAACGCAATTAAGACAAACTGCCCAATGGCAGTCTCCATTAGGATTGCAAAGGAACTTCAGCAATGTTGA | 297 | 44.11 | MLNLAEQWGWTGNDTETHLGKLLKQMIDESDPKLPFGYIKLDEVASRAKINSPPLMTMMSALNKEGYAVSRSHIASNAIKTNCPMAVSIRIAKELQQC* | 99 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01054 | 98 | FunFam | tRNA (guanine(26)-N(2))-dimethyltransferase | 35 | 94 | - | - | |
| Vivi19g01054 | 98 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 5 | 93 | IPR029063 | - | |
| Vivi19g01054 | 98 | Pfam | N2,N2-dimethylguanosine tRNA methyltransferase | 14 | 90 | IPR002905 | GO:0003723(InterPro)|GO:0008033(InterPro)|GO:0016423(InterPro) | |
| Vivi19g01054 | 98 | Gene3D | - | 35 | 95 | IPR042296 | - | |
| Vivi19g01054 | 98 | ProSiteProfiles | Trm1 methyltransferase domain profile. | 1 | 92 | IPR002905 | GO:0003723(InterPro)|GO:0008033(InterPro)|GO:0016423(InterPro) | |
| Vivi19g01054 | 98 | PANTHER | N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE | 1 | 95 | IPR002905 | GO:0002940(PANTHER)|GO:0003723(InterPro)|GO:0004809(PANTHER)|GO:0005634(PANTHER)|GO:0008033(InterPro)|GO:0016423(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01054 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr13:17530264 | Vivi19g01054 | Vivi-Chr19:21197352 | dispersed | |
| Vivi | Vivi-Chr19:21197352 | Vivi5g00178 | Vivi-Chr5:1782798 | dispersed |