Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01061 | ATGTGGCCTAATAAAGCAATATTACTGGTTATATTTTGGACACATCTCAATGCCATCAATGGCTTCTCCTTTTTCATTCCTTTCTCCTCTTCTTCTGCTCAGAAGATTCAGACTCATAAGTGGAGGCAACCGGTAGTCTCGGTTCTGGAGCTTGGTGGAGTCAAGATTGGCAGAGATGATGTGGTGAGGGATGATCCTACAAACAATGTCCCGGATGCAATTTTGTCGAAACTTGGAATGCAGCTTCACAGGAGGGATCAACACCCAATTGGAATTCTGAAGAATGCAATATATGATTATTTCGATGCCAATTACTCTAACAAATTTGATAAGTTGGATGACCTTTGCCCAATAGTCTCCACAAAAGAGAATTTTGATGATGTCTTGGTTCCTCCTGATCACATCAGTAGGAGTTACAATGATACATACTACATTGACTCTCAAACTGTCTTGAGGTGCCACACTAGTGCTCATCAAGCAGAGCTGTTGAGGAGGGGACACACTCATTTCCTTGTGACTGGAGATGTTTATCGTAGAGATTCCATTGATTCAACTCACTACCGTGTTTTTCATTAG | 576 | 41.49 | MWPNKAILLVIFWTHLNAINGFSFFIPFSSSSAQKIQTHKWRQPVVSVLELGGVKIGRDDVVRDDPTNNVPDAILSKLGMQLHRRDQHPIGILKNAIYDYFDANYSNKFDKLDDLCPIVSTKENFDDVLVPPDHISRSYNDTYYIDSQTVLRCHTSAHQAELLRRGHTHFLVTGDVYRRDSIDSTHYRVFH* | 192 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01061 | 191 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 63 | 191 | - | GO:0004826(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006432(PANTHER) | |
| Vivi19g01061 | 191 | Pfam | tRNA synthetases class II core domain (F) | 84 | 191 | IPR002319 | GO:0000049(InterPro)|GO:0004812(InterPro)|GO:0005524(InterPro)|GO:0043039(InterPro) | |
| Vivi19g01061 | 191 | FunFam | Phenylalanine--tRNA ligase chloroplastic-mitochondrial | 53 | 191 | - | - | |
| Vivi19g01061 | 191 | Gene3D | Bira Bifunctional Protein; Domain 2 | 53 | 191 | IPR045864 | - | |
| Vivi19g01061 | 191 | SUPERFAMILY | Class II aaRS and biotin synthetases | 77 | 191 | IPR045864 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01061 | K01889 | phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr19:21087508 | Vivi19g01061 | Vivi-Chr19:21410608 | dispersed | |
| Vivi | Vivi-Chr19:21410608 | Vivi1g00121 | Vivi-Chr1:1198056 | dispersed | |
| Vivi | Vivi-Chr19:21167540 | Vivi19g01061 | Vivi-Chr19:21410608 | proximal |