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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01069 ATGGTTCTGTTTGGGATACCTGATATTTGGCTTTTCTGGTCAACTGATGAGCGGTTCACCTCTCAATTCTCAAAGGGCCAGCTTGGGGTCAAGTTCAAGCCATTTTCAAAGTATCCTCCTTGTTACAAGGACAAGAGTTTTTGGATTAATGAGTTGTTCACAGAAAACAATTTATGTGATGTTGTAAGAGGAGTTGCTGGAGATCTTGTCGAGGGGGTGCAATTGATCGACAATTTCACCAACAAGAAAGGAATGACCAGTCAATGTTATCGGATAGCATACCGGTCCATGGAGCGTTCACTTACAGATGAGGAGATAAACGAGTTGCAGTGGAATGTTAGGGAGCAAGTGCAGAGCAAGTTGAAGGTTGTTCTTAGATGA 381 42.78 MVLFGIPDIWLFWSTDERFTSQFSKGQLGVKFKPFSKYPPCYKDKSFWINELFTENNLCDVVRGVAGDLVEGVQLIDNFTNKKGMTSQCYRIAYRSMERSLTDEEINELQWNVREQVQSKLKVVLR* 127
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01069 126 SMART FDX-ACB-2 36 126 IPR005121 -
Vivi19g01069 126 Gene3D Bira Bifunctional Protein; Domain 2 1 32 IPR045864 -
Vivi19g01069 126 FunFam Phenylalanine--tRNA ligase chloroplastic-mitochondrial 33 126 - -
Vivi19g01069 126 ProSiteProfiles Ferredoxin-fold anticodon binding (FDX-ACB) domain profile. 36 126 IPR005121 -
Vivi19g01069 126 Gene3D - 33 125 IPR036690 -
Vivi19g01069 126 Pfam Ferredoxin-fold anticodon binding domain 36 126 IPR005121 -
Vivi19g01069 126 SUPERFAMILY Anticodon-binding domain of PheRS 31 126 IPR036690 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01069 K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]