Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01081 | ATGGTACTTGCATGCCTGTTGACGTCTGATGAATCTCACGGACGTGTGAAAATGCATGATGTCATTCGTGATATGGCTTTGTGGATAGCTTGTGAAAATGGGAAGAAGAAGAACAAATTTGTGGTAAAAGAGCAAGTTGAATTGATTAAAGGCCATGAAATTACAAAATGGAAGAACGCACAAAGGATATCAGTTTGGAATAGTGGTATCGAAGAACGCATGGCACCACCACCTTTTCCTAATCTTGAGACTCTGTTGTCAGTGGGTGGATTGATGAAGCCATTTCTAAGTGGGTTCTTTAGATATATGCCTGTCATAAGAGTGTTGGCCTTGGTAGAAAACTATGAACTGACGGAGTTACCTGTGGAGATTGGTGAATTGGTTACATTGCAGTATCTTAATTTATCACTCACGGGAATAAAAGAGTTACCAATGGAGCTTAAGAAATTGACAAAACTGAGGTGCTTGGTATTGGATGACATGCTTGGACTTAAAACAATTCCACATCAAATGATATCAAGTCTTTCATCTTTGGAATCGTTCAGTTTTTACAATTCTGGAGCCACCATTGGAGATTGCAGTGCCTTATTAGAGGAGTTAGAGAGCTTGGAACACCTGAACGAGATATTCATCACACTTAGAAGTGTCACTCCTGTAAAAAGATTACTGAACTCTCACAAGTTACGAAGGGGCATAAATCGGCTACATGTAGAATCCTGCAACCACCTGAGCTCACTCAATGTGTACCCTTATCTGCAGAAACTTGAAATAAACATATGTGATGACTTGGAAGATGTGAAATTCATTGTGGAAAAGGAAAGGGGTGGGGGATTTGCAGCATATAATGTGGTCCAATCAAACATGGCAAAGCACCAAAACTTCTGCTATCTTCGTCATGTAGCGATATGTCATTGTCCAAAATTATTGAACTTAACATGGTTTATTTATGCTACACGCCTTCAATTCCTTAATGTTAGTTTCTGTGATTCAATGGAAGAAGTGGTAGAAGATAAAAAGAATGGAGTTTCAGAAATTCAGCAAGAGTTAGGCCTATTCTCAAGACTCGTATCTCTCCATTTGTCTTGTCTACCAAATCTAAGGAGAATATATAGAAGGCCTCTACAATTTCCTTCCCTAAAAGAGATGACTGTTAAATACTGTCCAAATCTGGGGAAGCTGCCATTTGATTCCAAAGCTGGGATTAGTAACAGTTTACAGAAGATCCATGGAGCCCAGGAATGGTGGGATGGGCTAGAGTGGGAGGACCAAACCATTATGCAAAACCTCATCCCATACTTCGTTCCGATTCTGGTCTTCGCGATCACGATTGAGGTGTGA | 1338 | 40.13 | MVLACLLTSDESHGRVKMHDVIRDMALWIACENGKKKNKFVVKEQVELIKGHEITKWKNAQRISVWNSGIEERMAPPPFPNLETLLSVGGLMKPFLSGFFRYMPVIRVLALVENYELTELPVEIGELVTLQYLNLSLTGIKELPMELKKLTKLRCLVLDDMLGLKTIPHQMISSLSSLESFSFYNSGATIGDCSALLEELESLEHLNEIFITLRSVTPVKRLLNSHKLRRGINRLHVESCNHLSSLNVYPYLQKLEINICDDLEDVKFIVEKERGGGFAAYNVVQSNMAKHQNFCYLRHVAICHCPKLLNLTWFIYATRLQFLNVSFCDSMEEVVEDKKNGVSEIQQELGLFSRLVSLHLSCLPNLRRIYRRPLQFPSLKEMTVKYCPNLGKLPFDSKAGISNSLQKIHGAQEWWDGLEWEDQTIMQNLIPYFVPILVFAITIEV* | 446 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01081 | 445 | Gene3D | Ribonuclease Inhibitor | 32 | 272 | IPR032675 | - | |
| Vivi19g01081 | 445 | Gene3D | Ribonuclease Inhibitor | 293 | 408 | IPR032675 | - | |
| Vivi19g01081 | 445 | SUPERFAMILY | L domain-like | 6 | 409 | - | - | |
| Vivi19g01081 | 445 | PANTHER | NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED | 5 | 396 | IPR050905 | - | |
| Vivi19g01081 | 445 | Coils | Coil | 328 | 348 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01081 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr19:21850794 | Vivi9g00475 | Vivi-Chr9:5737378 | dispersed | |
| Vivi | Vivi-Chr19:21850794 | Vivi19g01083 | Vivi-Chr19:21874071 | proximal | |
| Vivi | Vivi-Chr19:21839338 | Vivi19g01081 | Vivi-Chr19:21850794 | tandem |