Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01092 | ATGTCGACGATAAAAATTGCTCCCGACCTAGGGGTGGAACGCATCCAGGGAGAAGGGGGTATATACAGTGCAACAAAGGAATTTTTACAATTTTTGCGAAGTGCTTGTGATGATGCTGGGGCTCTCCTTGTTTTCGATGAGGTTCAATGTGGTCTAGGCCGAACTGGGCACCTCTGGGCTCATGAGTCCTATGGTGTATTCCCTGACATAATGACACTTGCCAAGCCTCTTGCTGGAGGCCTACCTATTGGTGCTGTACTGGTTACCGAACAAGTTGCTTCTGCCGTAAACTTCGGTGACCATGGAAGCACTTTTGCTGGCAGCCCCCTTGTCTGCAACGCTGCTCTTGCTGTCCTTAAAAAAAATCTCAGAACCCAGCTTCTTGGCCAGTGTCGCCAAGAAGGGCCAATACCTGAAACAAATTTTAACCCAGAAGTTGGGACATAA | 447 | 48.55 | MSTIKIAPDLGVERIQGEGGIYSATKEFLQFLRSACDDAGALLVFDEVQCGLGRTGHLWAHESYGVFPDIMTLAKPLAGGLPIGAVLVTEQVASAVNFGDHGSTFAGSPLVCNAALAVLKKNLRTQLLGQCRQEGPIPETNFNPEVGT* | 149 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01092 | 148 | Gene3D | - | 12 | 125 | IPR015421 | - | |
| Vivi19g01092 | 148 | Pfam | Aminotransferase class-III | 12 | 133 | IPR005814 | GO:0008483(InterPro)|GO:0030170(InterPro) | |
| Vivi19g01092 | 148 | SUPERFAMILY | PLP-dependent transferases | 12 | 137 | IPR015424 | - | |
| Vivi19g01092 | 148 | ProSitePatterns | Aminotransferases class-III pyridoxal-phosphate attachment site. | 43 | 80 | IPR049704 | - | |
| Vivi19g01092 | 148 | PANTHER | AMINOTRANSFERASE CLASS III | 11 | 135 | IPR050103 | GO:0009570(PANTHER)|GO:0030170(PANTHER)|GO:0042802(PANTHER) | |
| Vivi19g01092 | 148 | Gene3D | Aspartate Aminotransferase, domain 1 | 126 | 136 | IPR015422 | - | |
| Vivi19g01092 | 148 | FunFam | Acetylornithine aminotransferase | 6 | 125 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01092 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr19:22065409 | Vivi9g00679 | Vivi-Chr9:9871408 | dispersed | |
| Vivi | Vivi-Chr19:22065409 | Vivi19g01095 | Vivi-Chr19:22076110 | proximal |