AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01106 ATGGAAGGTGGTTCTGGTGTAGCATTTGGGTACATACATAAGGATTTGAGGCTTGGAAGTGATGAAATTGCTCGATTACGTGACACAGACTTGAAGAATTTGTTACGCCATAAAAAGCTTTACTTGGTTCTTGATTTAGATCACACACTTCTTAACTCAACTCGGCTTTTAGATATAACACCAGAGGAGCTGTATTTAAAGAACCAAACGGATCCTTTGCAAGGTATGATCTGTTTACCAGTTTATGTCATTATGGCTCATAGAATAACCAATTTTCCAATTTCAATTGTTTATGTTTCTCCAAAGTCTACCGTTTCTTGTTCATGCCATGGGGCCCATAACTTAATTCTATATGTGGAAGGGAGCTAA 369 37.67 MEGGSGVAFGYIHKDLRLGSDEIARLRDTDLKNLLRHKKLYLVLDLDHTLLNSTRLLDITPEELYLKNQTDPLQGMICLPVYVIMAHRITNFPISIVYVSPKSTVSCSCHGAHNLILYVEGS* 123
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01106 122 SUPERFAMILY HAD-like 31 65 IPR036412 -
Vivi19g01106 122 PANTHER RNA POLYMERASE II CTD PHOSPHATASE 9 70 IPR039189 GO:0008420(InterPro)|GO:0008420(PANTHER)|GO:0070940(PANTHER)
Vivi19g01106 122 Gene3D - 22 88 IPR023214 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01106 - -