AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01110 ATGGCTGCTGACGTCACATCTGTAGTTCGGATTCTGGGCGGTTACAAGGACGACCCCGCGGTTGGGAGCGAGTCCGGGAATTCCACGGTCCTGATCACTCGGGACCTTCTCGGCGGCGGTGGTGGTGGTTTGTCGTCGAAGCTTGATTCTCAGGAGCTCGACCTCGATTTGAAGGTGCCTGATGGCTGGGAGAAGCGGCTTGATTTGAAGTCAGGGAAAGTCTATCTCCAGAGATGCAATTCTCCGATGTCATCCTCTTCATCATCACAAAACAAGCATCATCCAACCAATGAAACAGTGCCAACCCTTCAAGATTTGAACTTCCCTCCAAACCCTAAACCCACCCTAAACCTCTTTGAGGACACTAATTTAGACCTCAAGCTCGTGCCATCGTCCTTCAATTACCCGAGCGTGTGCACTTTGGACAAAGTAAAATCAGCTTTGGAGAGAGCTGAACGCTCGACGATCAAAAAACGATCATCCTCCATGTCCAAATCATCGTCCCTATACTTCACCGCTGGATGCCCCGGTTGCCTCCTCTACGTGCTAATATCGAAGAACAACCCTAAATGTCCTAGATGCAATTCAGTCGTTCCAACACCAGCGACCACCAAGAAGCCTAGAATCGATCTAAATATATCGATATGA 648 49.54 MAADVTSVVRILGGYKDDPAVGSESGNSTVLITRDLLGGGGGGLSSKLDSQELDLDLKVPDGWEKRLDLKSGKVYLQRCNSPMSSSSSSQNKHHPTNETVPTLQDLNFPPNPKPTLNLFEDTNLDLKLVPSSFNYPSVCTLDKVKSALERAERSTIKKRSSSMSKSSSLYFTAGCPGCLLYVLISKNNPKCPRCNSVVPTPATTKKPRIDLNISI* 216
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01110 215 PANTHER PUTATIVE-RELATED 57 213 - -
Vivi19g01110 215 MobiDBLite consensus disorder prediction 80 108 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01110 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr10:12328573 Vivi19g01110 Vivi-Chr19:22323046 dispersed