AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01116 ATGGAAGAAACTGATAGATACAACGGCGGTTTCATCGTCGGTGGCGGAGATGGAGACGACGGCGATGAGGCGCAAAGAAGCAGTGTTTTCGCAGAGCTGAAAACCTACTGCTTGGAACTTCTGGGGCTTCTCCAAAATCCTCAGAAACACTCCTCGGCGCTCCCTCAGCTCCTCCGCTTTCTCCGAAAATCTCCCTCCGTTTCCCTTCAACCGTTTCTCGACTACACGTTGTTCCCATTGCTGCTTCTATTGGATGCTGCAGTTGATTGCAGATCCCTAAAAAAGGTTGATTCTGAAGAGAAGTTGATATCTGATGTCCCAAAAATGCCGCATAAGGTGAGCGACAGTGTGGCAGAAGGCGTGCTTCATTGCTTGGAAGAACTTCTTAAGAAGTGCCAATTAGGGTCAGTGGATCAGATGGTTGTGGTGCTGAAGAAATTGACTTACGGGGCTTTGCTTTCTGCATCTGAGGCTGCAGAAGAATTTCGTGAAGGAGTAATTAGGTGCTTCAGGGCACTTATTCTTAGTTTACAACCGTGTTCTGATATGTCATGCTCCTGTAAACAAAGTTTGGGTTTTCCCATACTTTTAGCAAGTGGAGATTTGCAAGTTCCACTCGTTAACACTTCAAAATATGATTCAGAACCAGGAGAATGTTTAATTGCATTTCTCCAGTCTCAAGGTGCTTCAGCTGCTGTTGGACACTGGTTATCTCTTCTTCTAAAAGCTGCAGATACCGAGGCTCAACGAGGACATCGAGGTAGTGCAAAGCTCCGTGTAGAAGCCTTTTTGTCCCTTCGTATGCTTGTCGCTAAGGTTGGTTCTGCAGATGCATTAGCTTTCTTTTTGCCTGGTGTTGTTAGTCAATTTTCAAAAGTTTTGTATGTCTCGAAAACAATGATTAGTGGGGCTGCTGGAAGTGTGGAAGCTATAGATCAAGCAATTAGAGGTGTGGCTGAGTTTCTTATGGTAGTCCTTCGGGACGATGCTAATTTATCGGGTCTTGATAATGTTATTGCTGGCTGTCACACAAACAAGGATGAATCTACACAATCATTTCTGGAGGAGCTCCGCCAGTTGCCTCTTAAAGCTCAAGGACAAAGTGAAACTATAGCAGAAGATTCAAGTGGTGAAATTATTAGTTCCATTTCTCCCAAATTTGGTTTTGAAGAGAAGGGTAGCATTAGTTCTAGAAAAATGTTAGGATCCTTGCATGTAACTCGTACAAAAGATTGGATTGAGAAAACCTCCACACAAGTGGATAAACTATTGTGCACGACTTTCCCAAAAATATGTGTTCATCCAGCAAAAAAGGTGAGAAGAGGACTTTTGGTGGCCATACAAGGACTATTGTCAAAGTGCAGTCACACTCTGAAGAAAAGCAGACTGATGCTTTTGGAGTGTCTATGTGTTTTGGTTTGTGATGACTCTGAAGAGGTGTCTGCAGTTGCACAGGGGTTCCTTGAGTATTTATTTTCATCAAGTGATAAGCATCACATAGAATGTGATGTTGCCGAAATCTTCAGCAGGCTCATTGAAAATCTTCCAAAAGTGGTGCTTGGAAGTGAGGAATCGGTTGCACTGTCCCATGCTCAGCAATTACTTGTACTAATATATTTTTCTGGTCCTCAATTTGTGGTGGATCATCTTCTTCAGTCTCCTATAAAAGCTGCACGGTTCTTGGACGTTTTTGCTCTCTGTCTGAGTCAAAATTCAGTGTTTTCTGGTTCTATAGACAAGCTTCTTTTAGAAAGGCCATCCTCCACAGGATATCTGCAATCTGTTGCTGAGTTGAAATCAAGTATTCGCTTCACCAGTGATGACCAGGCCACCTTGAGTACTGCTCCATATGAGATTTCAAAGTTCGCAGGACTTAAGGATAAAGAGATACAATATCCATTAGAAAACATGCAGAAAGATTATGAGCTTCCACACATGCCCCCTTGGTTTGTTTATGTTGGTAGTCAGAAACTATACAAGGCTCTGGCAGGAATTCTTAGACTTGTAGGCTTGTCTACAATGGCAGACTTCAGAAGTGAAGGCTATTTGTCGGTTATCACTGATATTCCTCTAGGTTACTTTCGTAAATTGGTTTCTGAGGTCCGAATGAGGGAGTATAGTAAAGAAAGTTGGCAGTCTTGGTATCATAGAACTGGTTCAGGGCAGTTATTGCGCCAGGCAAGTACTGCAGCATGTATGCTCAATGAAATGATATTTGGCATATCAGATCAAGCGGTTGAGGATTTTGCAAGGATGTTTCAGAAGCATGAAGCACCCATGATTAATGAGTCTATTTGGAGAGTTTGGCAGGGAAGGGGTGCAAGAAGTCATTTAATTGATTGTATTGGTAATATAATGCATGAATATCTATCTTCTGAAGTGTGGGATCTTCCAACAGAACAGAAATCTTCTCTTCTACAAGCAGATGGTGAAGCTGGAAATTTCTCTCTACACTTTCTCTGTGACACTACTTTGCTACACCAGGAAATATATAGTTTCTTCGTTATTATTGATGGAATAGGCATCTTTAATATCTGCCTTGGAAATGATTTTGCCTCTAGTGGATTTCTTCATTCATCTCTTTATCTATTGCTTGAGAATCTTATTTGTCCAAACTTCCAAATCAGAAGGGCCTGTGATGCAATTTTACATGTTCTTGCTACTACCTCTGGCTACTCAACAGTAGGGCACTTAGTTTTGGAAAATGCGGACTATGTAATTGACTCTATATGTCGACAGTTACGCCATTTGGACCTCAACCCTCATGTACCAAATGTGCTTGGTGCAATGCTTTCCTATATTGGCATAGCTCATAAAATATTACCTCTGCTGGAGGAACCGATGCGCACTGTCTCTATGGAACTAGAGATTCTTGGCAGGCATCAACACCCAGATCTAACTATTCCCTTCTTAAAGGCTGTTGCAGAAATTGCCAAGGCATCAAAGAAGGAGGCTTGTTCAATGCCCATTCAGACAGAATCTTACTCCATACATGTCAAGTCTAAAATGTCTGATGTGGAAAAGAAAGCGAGGGTTGATTCTGGAAAAAGTTCAATATCATGTTACGAGGAGGATATGGATACGTCTCCAGAGGAGTCAGAGGGGGCAGATATCTACTTGAATGATGCTGATATGCATTTAGATGAATGGGAGAGCATTTTATTCAAGTTGAATGATTCGAAAAGATATCGACGAACAGTCGGATCCATTGCCAGTTCATGTTTAACAGCTGCAACCCCACTAGTTGCTTCAGTGAACCAAGCAGCATGCTTGGTGGCCTTGGATATTGTTGAGGATGGCATTGCAACTCTGGCGAAAGTGGAAGAGGCCTATAGGCATGAGAAGGAAACTAAAGAAGCAATTGAACGTGTGATTAAGATGTGTTCATTTTATCATCTCCAAGATACTCTTGATGCTGCTGAGGAAGGAACCGATGAGAATAGGTTGCTTCCTGCAATGAACAAAATATGGCCCTTCTTGGTCGTTTGTATTCGGAACAAGAATCCAGTGGCTGTCCGGAGATGTCTAGATGTGATGAGCAAAGTAATCCACATCTGTGGGGGAGACTTCTTTTCTCGCCGGTTCCACACTGACGGCACCCACTTCTGGAAACTTCTAACCACATCCCCATTTCAGAAGCAACCAGTCTCTAAAGAAGAGAGAATCCCATTACAACTTCCTTACAGAAGTGCTCCTACCTCACCAGAGGACTCAATGGCTGAAGTCTCAACTCTGAAAGTCCAGGCAGCTATGCTTAACATGATTGCGGACTTATCCCTGAACAAAAGGAGTGCTTCAGCATTGGAAGCAGTTCTCAAGAAGGTGAGCGGCCTGGTGGTCGGAATAGCTTGCAGCAGCGTTTCTGGTCTTCGTGATGCAGCCCTCAACGCCCTCACTGGACTTTCTTCAATTGATCCAGATCTCATTTGGCTTCTCCTAGCCGATGTATACTACACTTTCAGAAAGAAACACATCCCTTCACCACCCACCTCTGATTTACCGGAAATTTCCCAGATTTTGCCCCCACCCTCGTCTCCTAAAGACTACCTCTACGTGCAGTATGGAGGACAGAGCTATGGTTTTGATGTTGATTTCTCTTCTGTAGAAATTGTTTTCCAGAAACTGCATTCAGATGTTTTTACTTCACAAATGTACATTTGA 4161 42.8 MEETDRYNGGFIVGGGDGDDGDEAQRSSVFAELKTYCLELLGLLQNPQKHSSALPQLLRFLRKSPSVSLQPFLDYTLFPLLLLLDAAVDCRSLKKVDSEEKLISDVPKMPHKVSDSVAEGVLHCLEELLKKCQLGSVDQMVVVLKKLTYGALLSASEAAEEFREGVIRCFRALILSLQPCSDMSCSCKQSLGFPILLASGDLQVPLVNTSKYDSEPGECLIAFLQSQGASAAVGHWLSLLLKAADTEAQRGHRGSAKLRVEAFLSLRMLVAKVGSADALAFFLPGVVSQFSKVLYVSKTMISGAAGSVEAIDQAIRGVAEFLMVVLRDDANLSGLDNVIAGCHTNKDESTQSFLEELRQLPLKAQGQSETIAEDSSGEIISSISPKFGFEEKGSISSRKMLGSLHVTRTKDWIEKTSTQVDKLLCTTFPKICVHPAKKVRRGLLVAIQGLLSKCSHTLKKSRLMLLECLCVLVCDDSEEVSAVAQGFLEYLFSSSDKHHIECDVAEIFSRLIENLPKVVLGSEESVALSHAQQLLVLIYFSGPQFVVDHLLQSPIKAARFLDVFALCLSQNSVFSGSIDKLLLERPSSTGYLQSVAELKSSIRFTSDDQATLSTAPYEISKFAGLKDKEIQYPLENMQKDYELPHMPPWFVYVGSQKLYKALAGILRLVGLSTMADFRSEGYLSVITDIPLGYFRKLVSEVRMREYSKESWQSWYHRTGSGQLLRQASTAACMLNEMIFGISDQAVEDFARMFQKHEAPMINESIWRVWQGRGARSHLIDCIGNIMHEYLSSEVWDLPTEQKSSLLQADGEAGNFSLHFLCDTTLLHQEIYSFFVIIDGIGIFNICLGNDFASSGFLHSSLYLLLENLICPNFQIRRACDAILHVLATTSGYSTVGHLVLENADYVIDSICRQLRHLDLNPHVPNVLGAMLSYIGIAHKILPLLEEPMRTVSMELEILGRHQHPDLTIPFLKAVAEIAKASKKEACSMPIQTESYSIHVKSKMSDVEKKARVDSGKSSISCYEEDMDTSPEESEGADIYLNDADMHLDEWESILFKLNDSKRYRRTVGSIASSCLTAATPLVASVNQAACLVALDIVEDGIATLAKVEEAYRHEKETKEAIERVIKMCSFYHLQDTLDAAEEGTDENRLLPAMNKIWPFLVVCIRNKNPVAVRRCLDVMSKVIHICGGDFFSRRFHTDGTHFWKLLTTSPFQKQPVSKEERIPLQLPYRSAPTSPEDSMAEVSTLKVQAAMLNMIADLSLNKRSASALEAVLKKVSGLVVGIACSSVSGLRDAALNALTGLSSIDPDLIWLLLADVYYTFRKKHIPSPPTSDLPEISQILPPPSSPKDYLYVQYGGQSYGFDVDFSSVEIVFQKLHSDVFTSQMYI* 1387
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01116 1386 Coils Coil 1104 1124 - -
Vivi19g01116 1386 Pfam TELO2-interacting protein 1 861 951 IPR049362 -
Vivi19g01116 1386 SUPERFAMILY ARM repeat 35 1344 IPR016024 -
Vivi19g01116 1386 PANTHER TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER 23 1373 IPR052587 GO:0005737(PANTHER)|GO:0006338(PANTHER)|GO:0070209(PANTHER)
Vivi19g01116 1386 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01116 K20403 TELO2-interacting protein 1