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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01117 ATGTGCATAGAGTTTGTAGAAGAGAAGAAAGATTTGATCCAAGATATTCCTAAAGATCGGAAACTTTCAGAGCCACCCAAGATCCCACAGCCTACCTTAATAATTTGGGGAGACCAAGATAAGGTATTCCTAGTAGAACTAGCTCACAAATTGAAAAGGCATTTCAGGCGAGGAGGCCCAACTTGTGATCATAGAGCATACTTTTATCATAGAAAAGCCCAAGGAAATATTTAA 234 38.89 MCIEFVEEKKDLIQDIPKDRKLSEPPKIPQPTLIIWGDQDKVFLVELAHKLKRHFRRGGPTCDHRAYFYHRKAQGNI* 78
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01117 77 Gene3D alpha-beta hydrolase 4 74 IPR029058 -
Vivi19g01117 77 PANTHER SI:DKEY-122A22.2 1 56 IPR052370 -
Vivi19g01117 77 SUPERFAMILY alpha-beta-Hydrolases 17 68 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01117 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr19:21142903 Vivi19g01117 Vivi-Chr19:22472388 dispersed
Vivi Vivi-Chr19:21640042 Vivi19g01117 Vivi-Chr19:22472388 dispersed
Vivi Vivi-Chr19:21643265 Vivi19g01117 Vivi-Chr19:22472388 dispersed