AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01127 ATGCTGCTGATGCGATATTGTTCACATAGGTTTCCCATTCCTTGTGAGAAGAGGCTCACAAATTTCAGTCGGAGATCCTGGTTGGCCGCTGCTCGTGGGAATCTCAGTTGTTCCTTCGCACAAAATGGAAATATGGATGTTTCTCTCTCCAATAATTCTACTTTTTCAGGGATGGAGGATGTTTTAATGGGCTATATTTTTGGCAAGGAGAAGGCAACCAGAGTTGCACACTTGGTATGGAAGCATGTTGTCCAAAAAGGAGATACAGTTGTTGATGCCACTTGTGGCAATGGGTATGATACCTTGGCAATGCTCAAAATGGTTGCTGATGGGTCAGGTAGAGGTTGTGTTTATGGAATGGACATTCAAAAAGATGCTTTAGAGAATACTTCTTCATTGCTCAATGAATCGGTCAATCCAATTGAGAAAGAACTTGTTAAGCTCTTCACCATTTGTCACAGTAGAATGGAGGAAGTTGTTCCAAAGAGTACCACATTAAGGCTTGTTGCATTCAACTTGGGCTACCTTCCTGGTGGTGACAAAGAAGTAACTACAACATCAGCAACAACCATCTTAGCATTGCAAGCTGCAACAAGAATATTAGCATCTGGAGGGCTTATCAGCCTGATTGTTTATGTGGGGCATCCAGGAGGAAGGGATGAACTTGAGACCATCCAAGCTTTTGCCTCCGAACTGTCAGTTGAGGATTGGGTTTGCAGTGAATTCCAAATGCTAAACCGACCATTGGCCCCGGTACTCATTTTCTTATTCAAGAGATGA 780 43.08 MLLMRYCSHRFPIPCEKRLTNFSRRSWLAAARGNLSCSFAQNGNMDVSLSNNSTFSGMEDVLMGYIFGKEKATRVAHLVWKHVVQKGDTVVDATCGNGYDTLAMLKMVADGSGRGCVYGMDIQKDALENTSSLLNESVNPIEKELVKLFTICHSRMEEVVPKSTTLRLVAFNLGYLPGGDKEVTTTSATTILALQAATRILASGGLISLIVYVGHPGGRDELETIQAFASELSVEDWVCSEFQMLNRPLAPVLIFLFKR* 260
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01127 259 Pfam Putative rRNA methylase 117 257 IPR010719 -
Vivi19g01127 259 Gene3D Vaccinia Virus protein VP39 69 259 IPR029063 -
Vivi19g01127 259 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 220 IPR029063 -
Vivi19g01127 259 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 23 259 IPR010719 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01127 - -