Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi19g01134 | ATGGCTTGGAGCTTCACACCGGATGGTCTCATGGCTTTGAATTTTCCTTCCTTCCATCCCCAAAATTCCCCTCAGTTTCTCTCTTCCCAAACAAAACTTCGCCCATTTTCCTTCCGTTTTTCTCTTCCCAAAAACCAGAAGCCAAGAGCCCTGCGAGAATGGCGGGAGTACGAAGATGCCGTGAAGGAGAAAGACCTCGCTCGAGCCCTTCGGTTCTTGAAATCCGTGGAGACCAATCCAATCGAGCCATTCAACGATTCTTCTTCTTCGGATCTGGGGTTGGTTCAATCGGAGAGGGATTGGGAGGTTCTGGACGCCTGTTTGAATGCAGATGATATGAAGCTTGTTGGGAGCGCCTATTCGTTCCTCAAGAACAGAGGCTTCTTGCCCAATTTCGGAAAATGCAGAAATATTGTTTTGGAGGGATCAAGAGATGTTACGCCAACTGTGTTGAAGACTTCAACTGGTTTAGAAGTGTCTAAACTTTCACCAAAAAAATGGGGTCTTTCGGGAGGCTCAAGTGCTGCTTTAGCAGCTTTTCTTGGTGGGGTATCTCTTCTTCTTTCTCGAGGGATCGATATCAGACCTAACCTTGCAGCCATACTTGGTCTTGCTATCATAGATGCTGTCTTCCTCGGTGGTTCTTGTTTAGCTCAAATTTCAAGTTATTGGCCTCCATATAGGCGTCGGATCCTAGTTCATGAAGCAGGCCATCTGCTGACTGCTTACCTTATGGGTTGCCCAATTCGTGGGGTGATTTTAGACCCAATAGTTGCAATGCAAATGGGCATTCAAGGCCAGGCAGGGACTCAATTTTGGGATGAGAAACTGGAAAAAGAGTTAGCTGAAGGCCGCCTAAGTGGTACTACCTTTGACCGATACTGTATGGTCCTTTTTGCTGGAATTGCAGCTGAAGCTCTTGTTTATGGTGAGGCCGAGGGTGGAGAAAATGATGAGAACTTGTTCAGGAGCATTTGCGTTCTTCTGCGACCTCCATTAACTATTGGACAGATGTCAAATCAGGCAAGATGGTCAGTTCTGCAGTCCTACAACCTGCTCAAATGGCACAAACATGCCCACCGAGCTGCTGTCAAAGCTCTAGAGAGCGGTGGCAGTCTGAGTGTTGTCATCAGGAGGATCGAGGAAGCCATGTCTTCCAGTAGGTGA | 1167 | 47.47 | MAWSFTPDGLMALNFPSFHPQNSPQFLSSQTKLRPFSFRFSLPKNQKPRALREWREYEDAVKEKDLARALRFLKSVETNPIEPFNDSSSSDLGLVQSERDWEVLDACLNADDMKLVGSAYSFLKNRGFLPNFGKCRNIVLEGSRDVTPTVLKTSTGLEVSKLSPKKWGLSGGSSAALAAFLGGVSLLLSRGIDIRPNLAAILGLAIIDAVFLGGSCLAQISSYWPPYRRRILVHEAGHLLTAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDEKLEKELAEGRLSGTTFDRYCMVLFAGIAAEALVYGEAEGGENDENLFRSICVLLRPPLTIGQMSNQARWSVLQSYNLLKWHKHAHRAAVKALESGGSLSVVIRRIEEAMSSSR* | 389 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi19g01134 | 388 | FunFam | ATP-dependent zinc metalloprotease | 223 | 376 | - | - | |
| Vivi19g01134 | 388 | SUPERFAMILY | FtsH protease domain-like | 224 | 373 | IPR037219 | GO:0004176(InterPro)|GO:0004222(InterPro)|GO:0005524(InterPro)|GO:0006508(InterPro) | |
| Vivi19g01134 | 388 | Gene3D | Peptidase M41 | 222 | 376 | IPR037219 | GO:0004176(InterPro)|GO:0004222(InterPro)|GO:0005524(InterPro)|GO:0006508(InterPro) | |
| Vivi19g01134 | 388 | PANTHER | ATP-DEPENDENT ZINC METALLOPROTEASE-RELATED | 57 | 385 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi19g01134 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Vivi | Vivi-Chr14:4330836 | Vivi19g01134 | Vivi-Chr19:22763855 | dispersed |