AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01154 ATGGCTTATCTTCTACCAAATCTCTCACCATCTCTACTCATCTCTTCTTCCTCCAAATCAAAACCCAATTCAATTCCCACAAAACCCATTAATTTCAATCTCTCTTCTTCTTCTTCTTCTTCTTCCACTAGTACTACTCTTACCAATCTTCAATCCTCAACACTCCAGGATGCGCAGGTTAACCTCCAAACCGCAGGTGCGCATGATAACCAGCAGCAGAACCAGCAGCAGCAGCAGAGGGATGACTTCTATGTCAACCTGGGCCTTGCTGTACGGACTCTCCGTGAGGACCTCCCTTTGCTCTTCTCCAAAGACCTTAATTATGACATTTACAGGGATGATATAACTTTCTTAGACCCACTGAACACGTTTACTGGTATTGAGAACTATAAATTGATCTTCTGGGCATTAAGGTTTCATGGGCGGATTCTGTTTAGGGAGATTTCTCTTGAGGTTTTTAGGGTTTGGCAGCCTTCAGAGAATGTGATTTTGATTAGGTGGAACTTGAGGGGTGTCCCTAGGGTTCCATGGGAAGCTAAAGGAGAGTTTCAGGGCACATCCCGCTATAAATTGGATCGAAATGGGAAAATTTACGAACACAAAGTGGATAACTTAGCATTCAATTTCCCACAGCCGCTGAAACCGGCGGCATCAGTGTTGGATTTGGTCACTGCCTGCCCTGCAAGCCCGAATCCAACCTTCTTGTGGGGTTCGGCTGCAGACGTGTACTCGTCATCTTGGGTGGAGTTTTATAGGGCTGTGAGGGAGACATTGGATCGCCAAGAGCACAATCTTCTTGCCCAAGATGGATTGGTTACTTGTTCATAG 828 45.65 MAYLLPNLSPSLLISSSSKSKPNSIPTKPINFNLSSSSSSSSTSTTLTNLQSSTLQDAQVNLQTAGAHDNQQQNQQQQQRDDFYVNLGLAVRTLREDLPLLFSKDLNYDIYRDDITFLDPLNTFTGIENYKLIFWALRFHGRILFREISLEVFRVWQPSENVILIRWNLRGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQPLKPAASVLDLVTACPASPNPTFLWGSAADVYSSSWVEFYRAVRETLDRQEHNLLAQDGLVTCS* 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01154 275 SUPERFAMILY NTF2-like 105 201 IPR032710 -
Vivi19g01154 275 MobiDBLite consensus disorder prediction 15 48 - -
Vivi19g01154 275 PANTHER RIKEN CDNA 2310061I04 GENE 24 224 IPR018790 -
Vivi19g01154 275 Pfam Uncharacterized conserved protein (DUF2358) 90 200 IPR018790 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01154 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr15:18550288 Vivi19g01154 Vivi-Chr19:23132272 dispersed